Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_G10
         (231 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006708-22|AAF60420.2|  335|Caenorhabditis elegans Hypothetical...    27   2.4  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    26   3.1  
AF014939-3|AAB63927.1|  831|Caenorhabditis elegans Hypothetical ...    26   3.1  
AL023828-21|CAA19466.1|  381|Caenorhabditis elegans Hypothetical...    25   5.5  
AL023828-20|CAA19465.1|  378|Caenorhabditis elegans Hypothetical...    25   5.5  
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    25   7.2  
AF078157-3|AAG24079.1|  119|Caenorhabditis elegans Hypothetical ...    25   7.2  
Z68114-10|CAA92157.2|  322|Caenorhabditis elegans Hypothetical p...    25   9.5  
U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr...    25   9.5  
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr...    25   9.5  
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr...    25   9.5  
AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical ...    25   9.5  
AC024791-7|AAU20833.1|  278|Caenorhabditis elegans Hypothetical ...    25   9.5  
AB023496-1|BAA97564.1|  793|Caenorhabditis elegans kinesin like ...    25   9.5  

>AC006708-22|AAF60420.2|  335|Caenorhabditis elegans Hypothetical
           protein Y110A7A.2 protein.
          Length = 335

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +1

Query: 70  GCRNSDEGLSVHKHVREDR---LFIACRSV 150
           GC    E   V +HVR+DR   L + C+S+
Sbjct: 92  GCHKKGENSEVKRHVRDDRNLHLVLLCQSL 121


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 105 QTCSGRSSFYCLSLCASASKPILIVRNC 188
           QTC  R    CLS C +AS+P +   +C
Sbjct: 268 QTCQSRCENRCLSTC-TASQPSVCAPSC 294


>AF014939-3|AAB63927.1|  831|Caenorhabditis elegans Hypothetical
           protein ZC132.4 protein.
          Length = 831

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +2

Query: 23  SWSFHAVAASKLWIPRAAGIRTRAFQYTNMFGKIVFLLLVALCVGVKADTDCQEL 187
           +WS      S +W    A +RTR  Q  + +  I+ +    LC+ V   + CQE+
Sbjct: 21  AWSVIKRTISTIWNLGKACLRTRRAQRRHSWSTIIPI----LCIIVTVSSGCQEI 71


>AL023828-21|CAA19466.1|  381|Caenorhabditis elegans Hypothetical
           protein Y17G7B.18b protein.
          Length = 381

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 36  TRWRRLNYGSPGLQEFGRGPFSTQTCSGR 122
           T+W  LN+G  G++ F R  ++     GR
Sbjct: 269 TKWIHLNWGDDGMRRFFRRAYAQLHPGGR 297


>AL023828-20|CAA19465.1|  378|Caenorhabditis elegans Hypothetical
           protein Y17G7B.18a protein.
          Length = 378

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 36  TRWRRLNYGSPGLQEFGRGPFSTQTCSGR 122
           T+W  LN+G  G++ F R  ++     GR
Sbjct: 266 TKWIHLNWGDDGMRRFFRRAYAQLHPGGR 294


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 125 RSSRTCLCTERPSSEFLQPGGSIV*TPPPRGSSS 24
           + +  C C +R         G+    PPPRGS++
Sbjct: 269 KDANYCPCPQRQDDRTPPSSGTSAPQPPPRGSTA 302


>AF078157-3|AAG24079.1|  119|Caenorhabditis elegans Hypothetical
           protein F25E5.9 protein.
          Length = 119

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = -2

Query: 230 SLSIVQ---APHSVDIVTVPDNQYRL*RRRTERQAI 132
           SLSI +   APHS  +V+V   + R  RRRTE+  I
Sbjct: 65  SLSIEECMCAPHSFFLVSVVLLKRRTRRRRTEKSTI 100


>Z68114-10|CAA92157.2|  322|Caenorhabditis elegans Hypothetical
           protein F17A2.13 protein.
          Length = 322

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +1

Query: 91  GLSVHK-HVREDRLFIACRSVRRRQSR 168
           GL++ K H+++D L +  RS  RR++R
Sbjct: 144 GLTIIKSHIKKDNLDVESRSPARRETR 170


>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like protein
            protein 4,isoform c protein.
          Length = 1576

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 121  LPEHVCVLKGPRPNSCSPGDP 59
            L E    ++ P PNSC PG P
Sbjct: 1186 LTEERTAVECPTPNSCIPGAP 1206


>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like protein
            protein 4,isoform b protein.
          Length = 1610

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 121  LPEHVCVLKGPRPNSCSPGDP 59
            L E    ++ P PNSC PG P
Sbjct: 1186 LTEERTAVECPTPNSCIPGAP 1206


>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like protein
            protein 4,isoform a protein.
          Length = 1595

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 121  LPEHVCVLKGPRPNSCSPGDP 59
            L E    ++ P PNSC PG P
Sbjct: 1186 LTEERTAVECPTPNSCIPGAP 1206


>AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical
           protein C40A11.7 protein.
          Length = 220

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 93  PFSTQTCSGRSSFYCLSLCASASKPILIV 179
           P + Q  + RSS   L + AS  KP++++
Sbjct: 100 PINNQIRTYRSSHELLQIIASTKKPVVVI 128


>AC024791-7|AAU20833.1|  278|Caenorhabditis elegans Hypothetical
           protein Y47G6A.15 protein.
          Length = 278

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 119 KIVFLLLVALCVGVKADTDCQELLL 193
           KI+ L+L+A CV   A  D +  +L
Sbjct: 2   KIILLILIAACVSSDATNDSKNAVL 26


>AB023496-1|BAA97564.1|  793|Caenorhabditis elegans kinesin like
           protein KLP-4 protein.
          Length = 793

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 121 LPEHVCVLKGPRPNSCSPGDP 59
           L E    ++ P PNSC PG P
Sbjct: 606 LTEERTAVECPTPNSCIPGAP 626


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,489,404
Number of Sequences: 27780
Number of extensions: 101667
Number of successful extensions: 278
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 12,740,198
effective HSP length: 56
effective length of database: 11,184,518
effective search space used: 223690360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)