Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_G07
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 392 e-110
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 392 e-110
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 223 2e-87
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 177 6e-45
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 175 3e-44
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 175 3e-44
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 159 2e-39
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 100 2e-21
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 100 2e-21
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 99 3e-21
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 99 3e-21
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 99 3e-21
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 50 1e-06
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 38 0.007
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.007
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 37 0.015
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.25
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 31 1.00
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 31 1.00
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 1.00
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 1.00
AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set (trithora... 30 1.3
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 1.7
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.7
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.7
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 29 2.3
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 29 2.3
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 7.0
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 28 7.0
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 28 7.0
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 28 7.0
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 7.0
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 7.0
AF022976-1|AAC69075.1| 154|Caenorhabditis elegans Prion-like-(q... 28 7.0
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z75554-1|CAA99953.3| 681|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical pr... 27 9.3
U41993-3|AAA83445.1| 384|Caenorhabditis elegans Nuclear hormone... 27 9.3
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 392 bits (966), Expect = e-110
Identities = 184/220 (83%), Positives = 198/220 (90%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
KLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKI 361
EFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE+RF EI EVS +IKKI
Sbjct: 122 EFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKI 181
Query: 362 GYNPAAVAFVPISGWHGDXMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARP 541
GYNP AV FVPISG++GD MLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP RP
Sbjct: 182 GYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRP 241
Query: 542 TDKALRLPLQDVYEIGGIGTVPVGRVETGILKPGTVVVFA 661
TD+ LRLPLQDVY+IGGIGTVPVGRVETGI+KPG VV FA
Sbjct: 242 TDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFA 281
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 392 bits (966), Expect = e-110
Identities = 184/220 (83%), Positives = 198/220 (90%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
KLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKI 361
EFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE+RF EI EVS +IKKI
Sbjct: 122 EFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKI 181
Query: 362 GYNPAAVAFVPISGWHGDXMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARP 541
GYNP AV FVPISG++GD MLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP RP
Sbjct: 182 GYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRP 241
Query: 542 TDKALRLPLQDVYEIGGIGTVPVGRVETGILKPGTVVVFA 661
TD+ LRLPLQDVY+IGGIGTVPVGRVETGI+KPG VV FA
Sbjct: 242 TDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFA 281
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 223 bits (546), Expect(2) = 2e-87
Identities = 102/134 (76%), Positives = 115/134 (85%)
Frame = +2
Query: 260 LIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDXMLEPSTK 439
L+V NKMDSTEPP+SE+RF EI EVS +IKKIGYNP AV FVPISG++GD MLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 440 MPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYEIGGIGTVPVGRV 619
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+ LRLPLQDVY+IGGIGTVPVGRV
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRV 233
Query: 620 ETGILKPGTVVVFA 661
ETGI+KPG VV FA
Sbjct: 234 ETGIIKPGMVVTFA 247
Score = 117 bits (281), Expect(2) = 2e-87
Identities = 53/56 (94%), Positives = 55/56 (98%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 169
KLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 177 bits (431), Expect = 6e-45
Identities = 88/111 (79%), Positives = 94/111 (84%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
KLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKK 334
EFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 122 EFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 54.0 bits (124), Expect = 9e-08
Identities = 40/93 (43%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +3
Query: 324 KSRRKSLPTSRKLVTI-RLPSLSYPFLAGTEXTCWSRPPKCHGSRDGWLSVKKERLKVNA 500
+S +S +SR+ TI RL LS TE TC P CHGSRDG L+ +KE L
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQS-PDSTETTCLRSPRTCHGSRDGLLNARKETLPERP 210
Query: 501 LLRPSTPSFRLLAPLTRLSVFPCKTYTKSAVLE 599
R TPS A LT SVF + T+S LE
Sbjct: 211 SSRLLTPSSHHNAQLTDHSVFHSRMCTRSEELE 243
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 175 bits (425), Expect = 3e-44
Identities = 92/222 (41%), Positives = 142/222 (63%), Gaps = 2/222 (0%)
Frame = +2
Query: 14 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 229 ERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFET 288
Query: 194 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI-KKIGYN 370
G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 289 GFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFS 346
Query: 371 PAAVAFVPISGWHGDXMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDK 550
FVP+SG+ G+ +++ ++ W+ +G CL+E +D+ + P P+D
Sbjct: 347 KP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDG 391
Query: 551 ALRLPLQDVYEIGGIGTVPVGRVETG-ILKPGTVVVFALLTS 673
LR+ + DV ++ V G++E+G + K V + + +T+
Sbjct: 392 PLRIGISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSSVTA 433
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 175 bits (425), Expect = 3e-44
Identities = 92/222 (41%), Positives = 142/222 (63%), Gaps = 2/222 (0%)
Frame = +2
Query: 14 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 247 ERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFET 306
Query: 194 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYI-KKIGYN 370
G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 307 GFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFS 364
Query: 371 PAAVAFVPISGWHGDXMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDK 550
FVP+SG+ G+ +++ ++ W+ +G CL+E +D+ + P P+D
Sbjct: 365 KP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDG 409
Query: 551 ALRLPLQDVYEIGGIGTVPVGRVETG-ILKPGTVVVFALLTS 673
LR+ + DV ++ V G++E+G + K V + + +T+
Sbjct: 410 PLRIGISDVLKVASNQLVVSGKIESGEVEKDDKVYIMSSVTA 451
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 159 bits (385), Expect = 2e-39
Identities = 84/216 (38%), Positives = 130/216 (60%), Gaps = 2/216 (0%)
Frame = +2
Query: 14 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE
Sbjct: 168 EREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFET 227
Query: 194 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNP 373
G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP
Sbjct: 228 GFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNP 287
Query: 374 AA-VAFVPISGWHGDXMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPP-ARPTD 547
+ +VP SG G + + T W G C IE +D +LP R +
Sbjct: 288 KTDITYVPCSGLTGAFIKDRPTGSE--GNWY--------SGPCFIEFIDVLLPSYKRDFN 337
Query: 548 KALRLPLQDVYEIGGIGTVPVGRVETGILKPGTVVV 655
+R + + Y +GTV +G++E+G ++ G +V
Sbjct: 338 GPVRCTVAEKY--SEMGTVIIGKMESGCVQKGDTLV 371
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 99.5 bits (237), Expect = 2e-21
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
K K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 85 KGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDG 144
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKI 361
E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 145 VME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLH 193
Query: 362 GYNPAAVAFVPISGWHGDXMLEPSTKMPWFKGWLVERKEGKAEGKC---LIEALDAILPP 532
G+N GD P +G + EG+ + C LI+ALD++ P
Sbjct: 194 GFN-------------GDA-------TPVIRGSALSALEGQ-DISCIERLIDALDSLPEP 232
Query: 533 ARPTDKALRLPLQDVYEIGGIGTVPVGRVETGILKPGTVV 652
R +P+ I G GTV VG +E G+LK G V
Sbjct: 233 DRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKV 272
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 99.5 bits (237), Expect = 2e-21
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 3/220 (1%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
K K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 85 KGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDG 144
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKI 361
E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 145 VME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLH 193
Query: 362 GYNPAAVAFVPISGWHGDXMLEPSTKMPWFKGWLVERKEGKAEGKC---LIEALDAILPP 532
G+N GD P +G + EG+ + C LI+ALD++ P
Sbjct: 194 GFN-------------GDA-------TPVIRGSALSALEGQ-DISCIERLIDALDSLPEP 232
Query: 533 ARPTDKALRLPLQDVYEIGGIGTVPVGRVETGILKPGTVV 652
R +P+ I G GTV VG +E G+LK G V
Sbjct: 233 DRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKV 272
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 98.7 bits (235), Expect = 3e-21
Identities = 77/213 (36%), Positives = 111/213 (52%), Gaps = 3/213 (1%)
Frame = +2
Query: 14 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 93 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 151
Query: 194 GISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY 367
QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++ + + GY
Sbjct: 152 ------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
Query: 368 NPAAVAFVPISGWHGDXMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALD-AILPPARPT 544
P P+ G + K P + G+ K L+E LD + P R
Sbjct: 203 -PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPERKV 248
Query: 545 DKALRLPLQDVYEIGGIGTVPVGRVETGILKPG 643
++ + VY I G GTV G++E GILK G
Sbjct: 249 NEEPMFAAEHVYSIVGRGTVITGKLERGILKRG 281
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 98.7 bits (235), Expect = 3e-21
Identities = 77/213 (36%), Positives = 111/213 (52%), Gaps = 3/213 (1%)
Frame = +2
Query: 14 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 152
Query: 194 GISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY 367
QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++ + + GY
Sbjct: 153 ------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
Query: 368 NPAAVAFVPISGWHGDXMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALD-AILPPARPT 544
P P+ G + K P + G+ K L+E LD + P R
Sbjct: 204 -PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPERKV 249
Query: 545 DKALRLPLQDVYEIGGIGTVPVGRVETGILKPG 643
++ + VY I G GTV G++E GILK G
Sbjct: 250 NEEPMFAAEHVYSIVGRGTVITGKLERGILKRG 282
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 98.7 bits (235), Expect = 3e-21
Identities = 77/213 (36%), Positives = 111/213 (52%), Gaps = 3/213 (1%)
Frame = +2
Query: 14 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 152
Query: 194 GISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGY 367
QTREH LLA +GV ++V +NK+D E P +E+R E ++ ++ + + GY
Sbjct: 153 ------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
Query: 368 NPAAVAFVPISGWHGDXMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALD-AILPPARPT 544
P P+ G + K P + G+ K L+E LD + P R
Sbjct: 204 -PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPERKV 249
Query: 545 DKALRLPLQDVYEIGGIGTVPVGRVETGILKPG 643
++ + VY I G GTV G++E GILK G
Sbjct: 250 NEEPMFAAEHVYSIVGRGTVITGKLERGILKRG 282
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 50.4 bits (115), Expect = 1e-06
Identities = 54/197 (27%), Positives = 89/197 (45%)
Frame = +2
Query: 77 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 256
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 257 QLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDXMLEPST 436
++I+ +NK D E +S+ E K+V +K +G + + PI +E S
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENS----PI--------VEMSL 170
Query: 437 KMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYEIGGIGTVPVGR 616
+FK +++ K IE+ I P R + + + + I G GTV G
Sbjct: 171 ADGYFKEEMLQNL------KLAIES--RIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGT 222
Query: 617 VETGILKPGTVVVFALL 667
V G+L+ T + F L
Sbjct: 223 VIRGVLRLNTEIEFPAL 239
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.4 bits (110), Expect = 5e-06
Identities = 33/95 (34%), Positives = 46/95 (48%)
Frame = +2
Query: 2 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
KL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 79 KLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
Query: 182 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 286
QT + LAF + Q+I +NK+D
Sbjct: 139 -------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/88 (38%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +2
Query: 26 GITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 202
GIT I + E K VT +D PGH F G AD VL+VAA G E
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE---- 243
Query: 203 KNGQTREHALLAFTLGVKQLIVGVNKMD 286
QT + A V QL+V VNK+D
Sbjct: 244 ---QTAQSIKFAKDANV-QLVVAVNKID 267
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/91 (34%), Positives = 40/91 (43%)
Frame = +2
Query: 14 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 193
ER+RGITI A + + IID PGH DF + D AVL++ G G
Sbjct: 93 ERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG---- 147
Query: 194 GISKNGQTREHALLAFTLGVKQLIVGVNKMD 286
G+ T L + + I VNKMD
Sbjct: 148 GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +2
Query: 74 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 253
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 254 KQLIVGVNKMDSTEPPYSESRFEEI 328
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 5 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
L ERERGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 68 LDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -2
Query: 279 LFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTA 151
LF PT+SC+ AS S P PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.00
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 14 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 166
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 30.7 bits (66), Expect = 1.00
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 14 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 166
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.00
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 14 ERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 178
E++RG +I I + Y + IID PGH +F M AD V++V A
Sbjct: 177 EKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHE 236
Query: 179 G 181
G
Sbjct: 237 G 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 1.00
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 14 ERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 178
E++RG +I I + Y + IID PGH +F M AD V++V A
Sbjct: 52 EKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHE 111
Query: 179 G 181
G
Sbjct: 112 G 112
>AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 27
protein.
Length = 502
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = -1
Query: 604 YCSNTADFVYVLQGKTESLV-SGASRRKDGVEGLNKAFTFSLSFFTLN-QPSLEPWHFGG 431
Y + + F Y L ++ + A RRKD + +++ F N P L W G
Sbjct: 207 YRTISRQFCYFLLAIAKNKIYEAAQRRKDARNAMETPIFYNVPFNVANFTPKLYFWAVGV 266
Query: 430 RLQHVISVPARNGYESDGSRIV 365
V VP+ N DG+ ++
Sbjct: 267 VTTRVNMVPSENQVGEDGNPVI 288
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 97 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 8
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 32 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 83 IIDAPGHRDFIKNMITGTSQADCAVLIV 166
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 32 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 181
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/94 (22%), Positives = 40/94 (42%)
Frame = -2
Query: 621 STLPTGTVPIPPISYTSCRGRRRALSVGRAGGRMASRASIRHLPSAFPSLRSTNHPLNHG 442
+T+P T+ YTS + R+ + + +H S L+S++ LN+
Sbjct: 115 TTVPETTIHRRSEEYTSYQPRKSKEEILQVNSASRPALPRQHSASTVSPLQSSSDELNND 174
Query: 441 ILVDGSNMXSPCQPEMGTKATAAGL*PIFLM*EE 340
+D + SP E ++T + P ++ EE
Sbjct: 175 SGIDNRTVGSPSTSEFSPRSTDLFVSPKSIIDEE 208
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 50 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 172
++ E G+ V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 166 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 35
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 166 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 35
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 27.9 bits (59), Expect = 7.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 631 PKAWYCCRFCP 663
P W CCRFCP
Sbjct: 872 PPQWECCRFCP 882
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 675 SDVSRAKTTTVPGFRIPVSTLPTGTVPIPPISYTSCR 565
S + +TVP VS PT + P+ P+S T R
Sbjct: 424 SSTANVICSTVPQSTASVSARPTQSAPVDPVSQTMAR 460
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 675 SDVSRAKTTTVPGFRIPVSTLPTGTVPIPPISYTSCR 565
S + +TVP VS PT + P+ P+S T R
Sbjct: 424 SSTANVICSTVPQSTASVSARPTQSAPVDPVSQTMAR 460
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 166 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 35
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 166 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 35
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>AF022976-1|AAC69075.1| 154|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 60
protein.
Length = 154
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 659 QKRQQYQALGYQFQLYPRVLFQYRRFRIRLAGEDGE 552
QKRQ Q+L YQ+ VLF R ++ G D +
Sbjct: 111 QKRQAIQSLRYQYPQEVSVLFHIREVSMKRMGIDDD 146
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 521 ILPPARPTDKALRLPLQDVYEIGGIGTVPVGRVETGILKPGTVVVFALL 667
I P R + + + + I G GTV G V G+L+ T + F L
Sbjct: 150 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPAL 198
>Z75554-1|CAA99953.3| 681|Caenorhabditis elegans Hypothetical
protein ZC455.1 protein.
Length = 681
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 423 WSRPP-KCHGSRDGWLSVKKERLKVNALLRPSTPSFRLLAPLTRLSV 560
WS P K GS+D W + R +N+ R S + R + +RLSV
Sbjct: 6 WSATPIKMVGSQDSWGTPPHYRSSLNSNYRDSPANSRNTSARSRLSV 52
>Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -2
Query: 288 ESILFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTAQSA*DVPVIMFLMK 109
++ +F P + + +A C C FF+ P S + ++T A +P M +K
Sbjct: 150 KNYIFPPILGLGSAFSEALAICFTACVFFDFPLSLGLICGFVVATVSPAVGMPT-MIRLK 208
Query: 108 SLCPGASMMVT*YLPVS-NFQRAISMVI 28
G + + +P + F +S++I
Sbjct: 209 EQGIGTTNNIPDVVPAACCFDNVVSLLI 236
>Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -2
Query: 288 ESILFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTAQSA*DVPVIMFLMK 109
++ +F P + + +A C C FF+ P S + ++T A +P M +K
Sbjct: 150 KNYIFPPILGLGSAFSEALAICFTACVFFDFPLSLGLICGFVVATVSPAVGMPT-MIRLK 208
Query: 108 SLCPGASMMVT*YLPVS-NFQRAISMVI 28
G + + +P + F +S++I
Sbjct: 209 EQGIGTTNNIPDVVPAACCFDNVVSLLI 236
>U41993-3|AAA83445.1| 384|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 39 protein.
Length = 384
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -1
Query: 601 CSNTADFVYVLQGKTESLVSGASRRKDGVEGLNKAFTFSLSFFTLNQPSL 452
CS T DF+ ++ ++ S + D V ++ ++ +++F+TL+ PSL
Sbjct: 80 CSTTNDFIINIEHSSDKKFSRLLQ--DLVSRDSRTYSKAINFYTLDDPSL 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,368,747
Number of Sequences: 27780
Number of extensions: 361484
Number of successful extensions: 1415
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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