BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_G06
(617 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night... 30 2.9
AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-P... 30 2.9
AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo pro... 30 2.9
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 29 5.0
>AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night
protein protein.
Length = 3579
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 522 VGQERRNGRNIHRSLEFVHLSVDLHHIVQQIDLKHLL 412
+G ER N H+S FVH V ++H QI L+ L
Sbjct: 52 LGSERHYKINAHKSANFVHHLVSVNHKDGQIQLRKAL 88
>AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-PA
protein.
Length = 3574
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 522 VGQERRNGRNIHRSLEFVHLSVDLHHIVQQIDLKHLL 412
+G ER N H+S FVH V ++H QI L+ L
Sbjct: 52 LGSERHYKINAHKSANFVHHLVSVNHKDGQIQLRKAL 88
>AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo
protein.
Length = 3575
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 522 VGQERRNGRNIHRSLEFVHLSVDLHHIVQQIDLKHLL 412
+G ER N H+S FVH V ++H QI L+ L
Sbjct: 52 LGSERHYKINAHKSANFVHHLVSVNHKDGQIQLRKAL 88
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 362 ARICGEIERICYRGKCGRRCFRSIC 436
AR CGE +IC G+C RC +C
Sbjct: 1297 ARPCGE-RQICINGRCKERCEGVVC 1320
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,691,912
Number of Sequences: 53049
Number of extensions: 583992
Number of successful extensions: 1543
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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