Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_G03
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical ...    31   0.88 
Z93386-1|CAB07645.1|  442|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical...    29   2.0  
U55376-1|AAA98003.1|  434|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical...    28   4.7  
Z82282-4|CAB05276.1|  485|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z82282-2|CAB05274.2|  544|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical...    28   6.2  
AF016425-1|AAD34668.1|  458|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical
           protein Y62E10A.6 protein.
          Length = 458

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -1

Query: 619 LNEWCIELLPTGVEVKRRGGRLEKIQFSAQRVV-VAVKDIGVCGGRRCTNFIFEHV 455
           + +W  +L  + ++ K     L K++   +R+  V VK+IG+  G R  +FIF  +
Sbjct: 235 IKDWDSKLEISEIDAKNLTESLPKLERKKKRLTEVLVKNIGIANGLRQCHFIFHRI 290


>Z93386-1|CAB07645.1|  442|Caenorhabditis elegans Hypothetical
           protein R11H6.2 protein.
          Length = 442

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 145 TGGTIRVDSESTRLPAHPRVSPLLRLILILFDVVTRLFNKHVTAVDAD 2
           TGG  + DS  T LP H  +S L+ LI +++  +    N  +  +  D
Sbjct: 301 TGGVTKDDSFVTPLPVHSLISLLIWLICLVYASIRNSSNTSLGKITGD 348


>AF039719-12|AAB96758.1|  293|Caenorhabditis elegans Hypothetical
           protein K04F10.7 protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 373 QCQSIRH*KHAKYSSSSELQHCRCRSGLHVQR*NWC 480
           QCQ  +    AKY      Q+C+  +  H Q+  WC
Sbjct: 25  QCQKCQK-NEAKYGKPGTCQYCKLNAAFHDQKCVWC 59


>U55376-1|AAA98003.1|  434|Caenorhabditis elegans Hypothetical
           protein F16H11.3 protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 204 EPRALSLWFSLPVMGTLTIAPEVPSELI 121
           +P  +  W+S   MG+LTIA ++P+  I
Sbjct: 57  KPDGVETWYSKEFMGSLTIASQLPNASI 84


>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
           protein B0511.12 protein.
          Length = 1634

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 91  RVSPLLRLILILFDVVTRLFNKHVTAVDAD 2
           R+S    L++ILFD++T  F KH+ +   D
Sbjct: 416 RMSSNQNLMVILFDIITSPFRKHLDSEQED 445


>Z82282-4|CAB05276.1|  485|Caenorhabditis elegans Hypothetical
           protein T07G12.4 protein.
          Length = 485

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -1

Query: 622 GLNEWCIELLPTGVEVKRRG--GRLEKIQFSAQR 527
           GL  +C++++ +G   K+RG   +LEKI+ S ++
Sbjct: 403 GLIAFCLDIIASGATRKQRGFEDKLEKIEISVEK 436


>Z82282-2|CAB05274.2|  544|Caenorhabditis elegans Hypothetical
           protein T07G12.2 protein.
          Length = 544

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -1

Query: 622 GLNEWCIELLPTGVEVKRRG--GRLEKIQFSAQR 527
           GL  +C++++ +G   K+RG   +LEKI+ S ++
Sbjct: 465 GLIAFCLDIIASGATRKQRGFEDKLEKIEISVEK 498


>Z79596-4|CAB01856.2|  554|Caenorhabditis elegans Hypothetical
           protein C02C6.2b protein.
          Length = 554

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 25/91 (27%), Positives = 42/91 (46%)
 Frame = -1

Query: 577 VKRRGGRLEKIQFSAQRVVVAVKDIGVCGGRRCTNFIFEHVVHSGTDSVEVRNLRNIWHV 398
           ++ +  RL  +Q  A+RVV  VK +     + C N+  + VV   T  +++  L +I   
Sbjct: 224 MRSKNNRLPYLQIRARRVVRNVKSLAAQTIKVCKNYATKTVV---TGLIDLTVLLSISFA 280

Query: 397 FSGECFGTEIVVVVMEEIYFTGSRHFVTEPR 305
           F        +V ++M  I F G  + V E R
Sbjct: 281 FPALPLFYILVPLLMLNIVFFGVIYKVQELR 311


>Z79596-3|CAI79132.1|  561|Caenorhabditis elegans Hypothetical
           protein C02C6.2a protein.
          Length = 561

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 25/91 (27%), Positives = 42/91 (46%)
 Frame = -1

Query: 577 VKRRGGRLEKIQFSAQRVVVAVKDIGVCGGRRCTNFIFEHVVHSGTDSVEVRNLRNIWHV 398
           ++ +  RL  +Q  A+RVV  VK +     + C N+  + VV   T  +++  L +I   
Sbjct: 231 MRSKNNRLPYLQIRARRVVRNVKSLAAQTIKVCKNYATKTVV---TGLIDLTVLLSISFA 287

Query: 397 FSGECFGTEIVVVVMEEIYFTGSRHFVTEPR 305
           F        +V ++M  I F G  + V E R
Sbjct: 288 FPALPLFYILVPLLMLNIVFFGVIYKVQELR 318


>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
            B0416.1 protein.
          Length = 1203

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -1

Query: 190  ELVVFIASYGYLDHSTGGTIRVDSESTRLPAHPRVSPLLRLILIL 56
            + V  + S   +DHSTG     DSEST     P++S   R ++ +
Sbjct: 876  QFVPSLGSVSEVDHSTGEEQSSDSESTTSSLPPKLSLRQRFLVCI 920


>AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical
           protein Y46G5A.10 protein.
          Length = 732

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 441 VPEWTTCSKIKL-VHLRPPHTPMSLT 515
           V E   C K+K+ V+ +PPH P+ +T
Sbjct: 258 VREKKNCDKLKINVYFKPPHPPVEIT 283


>AF016425-1|AAD34668.1|  458|Caenorhabditis elegans Hypothetical
           protein F59A7.1 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
 Frame = +2

Query: 296 THIP----GFGDKMTAAGKVNLFHNNN 364
           +H+P    GFGDK T +  +  F+NNN
Sbjct: 237 SHLPDPRLGFGDKTTGSDSLQKFYNNN 263


>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +2

Query: 212 LTNQMKLGAATAGLAY--DNVNGHGATLTKTHIPGF 313
           L  +MK+  A A +AY  DNVNG    L++   PG+
Sbjct: 180 LATRMKVDVAIATVAYGQDNVNGFLRQLSQIATPGY 215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,786,858
Number of Sequences: 27780
Number of extensions: 323434
Number of successful extensions: 808
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)