SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_G02
         (513 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070688-1|AAL48159.1|  471|Drosophila melanogaster RH24992p pro...    29   4.9  
AY070669-1|AAL48140.1|  471|Drosophila melanogaster RH06651p pro...    29   4.9  
AE014296-1677|AAF50253.2|  500|Drosophila melanogaster CG3424-PC...    29   4.9  
AE014296-1676|AAF50252.1|  471|Drosophila melanogaster CG3424-PA...    29   4.9  
AY089361-1|AAL90099.1|  212|Drosophila melanogaster AT18545p pro...    28   8.5  
AE014298-1448|AAF46581.1|  212|Drosophila melanogaster CG2222-PA...    28   8.5  

>AY070688-1|AAL48159.1|  471|Drosophila melanogaster RH24992p
           protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 393 SILFNLFLFYFSTCFI*L*IISS 461
           SILF LFL YF TC +   I++S
Sbjct: 152 SILFGLFLTYFGTCSVYTVIVAS 174


>AY070669-1|AAL48140.1|  471|Drosophila melanogaster RH06651p
           protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 393 SILFNLFLFYFSTCFI*L*IISS 461
           SILF LFL YF TC +   I++S
Sbjct: 152 SILFGLFLTYFGTCSVYTVIVAS 174


>AE014296-1677|AAF50253.2|  500|Drosophila melanogaster CG3424-PC,
           isoform C protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 393 SILFNLFLFYFSTCFI*L*IISS 461
           SILF LFL YF TC +   I++S
Sbjct: 181 SILFGLFLTYFGTCSVYTVIVAS 203


>AE014296-1676|AAF50252.1|  471|Drosophila melanogaster CG3424-PA,
           isoform A protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 393 SILFNLFLFYFSTCFI*L*IISS 461
           SILF LFL YF TC +   I++S
Sbjct: 152 SILFGLFLTYFGTCSVYTVIVAS 174


>AY089361-1|AAL90099.1|  212|Drosophila melanogaster AT18545p
           protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 217 IEHRTHEMGGSTNNYRCQYSVRTGPRIWHGELVDE 321
           IE + HE G  TN+   ++   TG +I   ELV+E
Sbjct: 152 IEAKLHEAGVRTNSQYIEWLQMTGNKIRTSELVEE 186


>AE014298-1448|AAF46581.1|  212|Drosophila melanogaster CG2222-PA
           protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 217 IEHRTHEMGGSTNNYRCQYSVRTGPRIWHGELVDE 321
           IE + HE G  TN+   ++   TG +I   ELV+E
Sbjct: 152 IEAKLHEAGVRTNSQYIEWLQMTGNKIRTSELVEE 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,377,080
Number of Sequences: 53049
Number of extensions: 340179
Number of successful extensions: 606
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -