Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_F24
         (647 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    25   0.48 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    25   0.83 
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    25   0.83 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   1.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   3.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.4  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   5.9  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   5.9  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 503 SHITLNYLNVLLFH*FIIT*RRYSVDYKKILPRPR 399
           S I +NY   L F+  ++  RR++++  K+L  PR
Sbjct: 15  SFILINYFIFLYFN-SLVRFRRFTIELDKVLESPR 48


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 2   VFVVQYFIPILMIILCYKR 58
           +F+  Y IP++ IIL Y R
Sbjct: 224 IFIWAYVIPLIFIILFYSR 242


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 2   VFVVQYFIPILMIILCYKR 58
           +F+  Y IP++ IIL Y R
Sbjct: 224 IFIWAYVIPLIFIILFYSR 242


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 342 FNDSEQYEFITFPLQQP 292
           ++ S Q+EF+TF L +P
Sbjct: 358 YSPSVQHEFVTFDLDEP 374


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 437 YSVDYKKILPRPRRLS*IYH 378
           + +D+ K LP P+ L  I+H
Sbjct: 496 WMIDFAKTLPLPQHLPRIHH 515


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 437 YSVDYKKILPRPRRLS*IYH 378
           + +D+ K LP P+ L  I+H
Sbjct: 411 WMIDFAKTLPLPQHLPRIHH 430


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 437 YSVDYKKILPRPRRLS*IYH 378
           + +D+ K LP P+ L  I+H
Sbjct: 730 WMIDFAKTLPLPQHLPRIHH 749


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 67  IIAYKQYNGDDNKDDFNSVRNYTNIL 144
           II+   YN  +  +++NS + Y NI+
Sbjct: 303 IISSNNYNYKNYNNNYNSKKLYYNII 328


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 67  IIAYKQYNGDDNKDDFNSVRNYTNIL 144
           II+   YN  +  +++NS + Y NI+
Sbjct: 314 IISSNNYNYKNYNNNYNSKKLYYNII 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,567
Number of Sequences: 438
Number of extensions: 3965
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)