Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_F20
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99102-1|CAB11776.1|  523|Caenorhabditis elegans Hypothetical pr...    35   0.055
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr...    31   0.68 
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr...    31   0.68 
Z49937-1|CAA90184.2|  670|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    28   6.3  
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne...    27   8.4  

>Z99102-1|CAB11776.1|  523|Caenorhabditis elegans Hypothetical
           protein B0331.2 protein.
          Length = 523

 Score = 34.7 bits (76), Expect = 0.055
 Identities = 22/53 (41%), Positives = 25/53 (47%)
 Frame = -2

Query: 420 RSSPRFSCFRLSVSLYACILV*SSKQLNLQSAKASMAIDIRTPAAITSHTIIT 262
           R  P F CF L V+LYACI    SK L L    A  A  I     +T   I+T
Sbjct: 234 RLCPIFMCFTLVVNLYACIYD-GSKYLGLDRLDAIEAFLISVAIGVTGWAILT 285


>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical
           protein F29D11.2 protein.
          Length = 1153

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 172 LLKVFLVEAILHLLLVVRQRNTERHRRAVFMIRPVYITE*RA 47
           L+KVFL E  + L +++ +     HR  VF +  V ITE +A
Sbjct: 128 LMKVFLDEIDVRLSMIIEEVTVPEHRARVFKLIAVTITEIQA 169


>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical
           protein F29D11.2 protein.
          Length = 1153

 Score = 31.1 bits (67), Expect = 0.68
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 172 LLKVFLVEAILHLLLVVRQRNTERHRRAVFMIRPVYITE*RA 47
           L+KVFL E  + L +++ +     HR  VF +  V ITE +A
Sbjct: 128 LMKVFLDEIDVRLSMIIEEVTVPEHRARVFKLIAVTITEIQA 169


>Z49937-1|CAA90184.2|  670|Caenorhabditis elegans Hypothetical
           protein F14F3.2 protein.
          Length = 670

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
 Frame = +2

Query: 383 TDSLKQEKRGLDLYPTPHQILPPLYSENDYKWADDSTRVDMGG--FANRSYVREDMYDFD 556
           T+  ++    L +  TP +++PP+  +  +   D   R+D GG  + + S  R +  D  
Sbjct: 476 TNMTRRMPSPLAIVETPERVMPPVGIQQGFSRRDSEDRIDGGGARWRSNSSDRRNSNDHK 535

Query: 557 SEEEVVPARDRFTPTCS 607
            +++V   +D    + S
Sbjct: 536 LDKKVERRQDSMMESSS 552


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
            protein F40G12.3 protein.
          Length = 1099

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -2

Query: 342  LNLQSAKASMAIDIRTPAAITSHTIITEFSSGVANSVIPIL 220
            +++QSA A++A+ + T     + +  T F S ++  + PIL
Sbjct: 984  ISVQSANATVAVTLTTNTTTQTTSSTTSFKSNLSTPLAPIL 1024


>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
            neurexin-like protein 1 protein.
          Length = 1655

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
 Frame = +2

Query: 251  DENSVMMVWLVIAAGVLISMAMLAFALWRFSCFEDYTRMQAYSDTDSLKQEKRGLDLYPT 430
            DE+S  ++W+V    VL  + ++ F ++   C E   ++ A  D + L  E   L + PT
Sbjct: 1457 DEDSGSLMWVVFIIFVLGVIFLIIFCIFMKCCRE---KIHA-RDDEYLHDEDIPLHMAPT 1512

Query: 431  ----PHQILPPLYSENDYKWADDSTRVDMGGFANRSYVREDMYDFDSEEEVVPARD 586
                P    PP+       +   +  +D        + +E+ +D+D E+E     D
Sbjct: 1513 ILRHPQPSPPPIKKSAASNYKIPNPNID--------FNKENTFDYDDEDEFAGIAD 1560


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,556,640
Number of Sequences: 27780
Number of extensions: 305972
Number of successful extensions: 972
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)