Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_F18
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical p... 129 2e-30
AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical... 54 9e-08
AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical... 54 9e-08
Z74031-15|CAE45046.1| 261|Caenorhabditis elegans Hypothetical p... 44 6e-05
U64843-11|AAL08038.1| 365|Caenorhabditis elegans Hypothetical p... 29 2.3
U28737-8|ABA61869.1| 537|Caenorhabditis elegans Hypothetical pr... 29 3.0
U28737-7|ABA61870.1| 501|Caenorhabditis elegans Hypothetical pr... 29 3.0
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 28 4.0
U80454-8|ABC71798.1| 623|Caenorhabditis elegans Hypothetical pr... 28 4.0
U80454-7|ABC48245.1| 650|Caenorhabditis elegans Hypothetical pr... 28 4.0
>Z81137-10|CAB03470.2| 232|Caenorhabditis elegans Hypothetical
protein W02D9.2 protein.
Length = 232
Score = 129 bits (311), Expect = 2e-30
Identities = 54/117 (46%), Positives = 81/117 (69%)
Frame = +1
Query: 4 PEFAEVFVIVWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLIICRVIXXXXXX 183
P+F +VF I + G+ +VT N KLLGGNISFFQS+CV+GYCLLP V+ ++C +
Sbjct: 120 PQFTQVFTITFFGSVIVTANIKLLGGNISFFQSLCVIGYCLLPPFVAAVLCSLF----LH 175
Query: 184 XXXXXXXXVISMVGFMWATFAATKFLGDSQPEGKKALAVYPICLFYFILSWLVVSHS 354
+I+ +GF+W+T+A+ FL QP+ K+ L +YP+ LFYF++SW+++SHS
Sbjct: 176 GIAFPLRLLITSIGFVWSTYASMGFLAGCQPDKKRLLVIYPVFLFYFVVSWMIISHS 232
>AL117207-21|CAN99696.1| 255|Caenorhabditis elegans Hypothetical
protein Y60A3A.19b protein.
Length = 255
Score = 53.6 bits (123), Expect = 9e-08
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +1
Query: 25 VIVWI-GAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLIICRVIXXXXXXXXXXXX 201
+ +W G +V ++ LGG++ + Q + ++GYCL+P+ V+ +I +
Sbjct: 152 ITIWFCGGFMVYFIARALGGDVGYSQVLGIVGYCLIPLVVTSLITPLFSSFRLLSNG--- 208
Query: 202 XXVISMVGFMWATFAATKFLGDSQPEGKKALAVYPICLFY 321
+ M G +W+ ++A L + + KK L VYP+ L Y
Sbjct: 209 ---LGMFGTIWSVYSAGTLLCVDELQAKKPLVVYPVFLLY 245
>AL117207-20|CAB60403.3| 228|Caenorhabditis elegans Hypothetical
protein Y60A3A.19a protein.
Length = 228
Score = 53.6 bits (123), Expect = 9e-08
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +1
Query: 25 VIVWI-GAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLIICRVIXXXXXXXXXXXX 201
+ +W G +V ++ LGG++ + Q + ++GYCL+P+ V+ +I +
Sbjct: 125 ITIWFCGGFMVYFIARALGGDVGYSQVLGIVGYCLIPLVVTSLITPLFSSFRLLSNG--- 181
Query: 202 XXVISMVGFMWATFAATKFLGDSQPEGKKALAVYPICLFY 321
+ M G +W+ ++A L + + KK L VYP+ L Y
Sbjct: 182 ---LGMFGTIWSVYSAGTLLCVDELQAKKPLVVYPVFLLY 218
>Z74031-15|CAE45046.1| 261|Caenorhabditis elegans Hypothetical
protein F32D8.14 protein.
Length = 261
Score = 44.4 bits (100), Expect = 6e-05
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 82 NISFFQSVCVLGYCLLPVAVSLIICRVIXXXXXXXXXXXXXXVISMVGFMWATFAATK-F 258
NISF + VLGYCLLP+A+ I+ V+ +IS + +W + A++K F
Sbjct: 178 NISFTCTASVLGYCLLPMALLSIVTAVL------SFKGIIGYIISSLAVLWCSSASSKLF 231
Query: 259 LGDSQPEGKKALAVYPICLFYFILSWLVV 345
+ + ++ L YP L Y + + L +
Sbjct: 232 VIALSMDHQRLLVAYPCVLLYSVFALLAI 260
>U64843-11|AAL08038.1| 365|Caenorhabditis elegans Hypothetical
protein K06C4.17 protein.
Length = 365
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -3
Query: 560 KIYFLTILQNHTLFLVIKFRYNENPFHTSQ*LR 462
KI+FL + N ++ L++K+ +NE TSQ +R
Sbjct: 240 KIFFLLFIINVSIILLLKYSHNERIRMTSQSIR 272
>U28737-8|ABA61869.1| 537|Caenorhabditis elegans Hypothetical
protein F14B8.5a protein.
Length = 537
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 31 VWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLIICRVI 165
V+ GA +N +G +F VLG CLL +A+ LI+C ++
Sbjct: 361 VYNGACAAAVNVNNVGVAYAFRTWTIVLG-CLLGIALLLILCLIL 404
>U28737-7|ABA61870.1| 501|Caenorhabditis elegans Hypothetical
protein F14B8.5b protein.
Length = 501
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 31 VWIGAAVVTLNSKLLGGNISFFQSVCVLGYCLLPVAVSLIICRVI 165
V+ GA +N +G +F VLG CLL +A+ LI+C ++
Sbjct: 325 VYNGACAAAVNVNNVGVAYAFRTWTIVLG-CLLGIALLLILCLIL 368
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 324 EIKQAYWV-NSECLFTLGLTVAEEFRRGKSSPHEADH*YDEPQEEKECCLSTE*NNAADD 148
++ A W+ + E + T L VAE++ + +S P + + EP++ K + E DD
Sbjct: 781 DVGDALWLWSEEVITTFALKVAEKYWKDRSGPAKVVYKGAEPEQFKGLFMKWEMFEVEDD 840
Query: 147 Q 145
+
Sbjct: 841 K 841
>U80454-8|ABC71798.1| 623|Caenorhabditis elegans Hypothetical
protein T16A1.1b protein.
Length = 623
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 171 QYSDNIPFLLEARHINGRLHVGYFCRDE 254
QY NIP+ L AR G L + FC +E
Sbjct: 319 QYRFNIPWRLRARKTLGFLEIVLFCNEE 346
>U80454-7|ABC48245.1| 650|Caenorhabditis elegans Hypothetical
protein T16A1.1a protein.
Length = 650
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 171 QYSDNIPFLLEARHINGRLHVGYFCRDE 254
QY NIP+ L AR G L + FC +E
Sbjct: 319 QYRFNIPWRLRARKTLGFLEIVLFCNEE 346
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,620,684
Number of Sequences: 27780
Number of extensions: 284859
Number of successful extensions: 841
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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