Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_F18
         (562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    25   0.52 
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    25   0.52 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    25   0.52 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   0.91 
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   2.1  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   4.9  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   6.4  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   6.4  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    21   6.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   6.4  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 284 KRHSLFTQYACFISYCLG 337
           KR  LF    CF+SY +G
Sbjct: 413 KRKELFIAIVCFVSYLIG 430


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 284 KRHSLFTQYACFISYCLG 337
           KR  LF    CF+SY +G
Sbjct: 466 KRKELFIAIVCFVSYLIG 483


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 432 YNNMHIKNTKYVRPYHNK*IQLYLNV 355
           YNN +  N  Y   Y+N   +LY N+
Sbjct: 333 YNNNNYNNNNYNNNYNNNCKKLYYNI 358


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 28  IVWIGAAVVTLNSKLLGGN 84
           +VW+GAA ++L   L+ GN
Sbjct: 164 LVWLGAACISLPPLLIMGN 182


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -2

Query: 453 KIKTHLKYNNMHIKNTKYVRPYHNK*IQLYLNVTMGDDEP 334
           K   +  YNN +     Y   Y+N   +LY N+   +  P
Sbjct: 323 KYSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNINYIEQIP 362


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 450 IKTHLKYNNMHIKNTKYVRPYHNK*IQLYLNVTMGDDEP 334
           I  +  YNN +  N  Y    +N   +LY N+   +  P
Sbjct: 90  IHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNINYIEQIP 128


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 462 IVLKIKTHLKYNNMHIKNTKYVRPYHN 382
           I+  +  + KY+N +  N  Y   Y+N
Sbjct: 81  IISSLSNNYKYSNYNNYNNNYNNNYNN 107


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 462 IVLKIKTHLKYNNMHIKNTKYVRPYHN 382
           I+  +  + KY+N +  N  Y   Y+N
Sbjct: 81  IISSLSNNYKYSNYNNYNNNYNNNYNN 107


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -2

Query: 462 IVLKIKTHLKYNNMHIKNTKYVRPYHN 382
           I+  +     Y+N +  N  Y + Y+N
Sbjct: 303 IISSLSNSCNYSNNYYNNNNYKKLYYN 329


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -2

Query: 456 LKIKTHLKYNNMHIKNTKYVRPYHN 382
           + +K H  +  +H K+ K    +HN
Sbjct: 505 VNLKGHAHWLTLHFKDPKVESAFHN 529


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,773
Number of Sequences: 438
Number of extensions: 3721
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)