Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_F17
         (459 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83113-2|CAB05544.1|  479|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z68120-2|CAA92200.1|  218|Caenorhabditis elegans Hypothetical pr...    28   3.8  
U28993-3|AAT81196.1|  635|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U28993-2|AAK31497.1|  720|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AF100662-1|AAC68977.1|  900|Caenorhabditis elegans Hypothetical ...    27   5.0  
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p...    27   6.6  
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z78018-2|CAB01447.1|  434|Caenorhabditis elegans Hypothetical pr...    27   6.6  
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ...    27   6.6  

>Z83113-2|CAB05544.1|  479|Caenorhabditis elegans Hypothetical
           protein K08H10.4 protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 201 AAVMKTLRLENDGXGEVINLVVNRLLSEGKRNIV-EYAYKLWNMFGTN 341
           AA +  L+LE D   E  + ++   + EG +    EYA K WN+ G++
Sbjct: 256 AARLNILQLETDNEIESTHQLITSCMPEGYQLTEWEYALKFWNINGSS 303


>Z68120-2|CAA92200.1|  218|Caenorhabditis elegans Hypothetical
           protein T24C2.2 protein.
          Length = 218

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +3

Query: 141 LNNINSYEQLYDSVVVG-DYKAAVMKTLRLENDGXGEVI--NLVVNR--LLSEGKRNIVE 305
           + N NS  +   +++V  D K A++  LRL+ DG    +  N + +   +L E K+  VE
Sbjct: 27  VENYNSENRFERTIIVANDNKTAILLILRLKQDGVKTSVFTNYLADDEIVLGEQKKAFVE 86

Query: 306 YAYKL 320
            A+K+
Sbjct: 87  GAHKV 91


>U28993-3|AAT81196.1|  635|Caenorhabditis elegans Hypothetical
           protein F22D3.2b protein.
          Length = 635

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 38  DFNDNGAECTGDASV-PYTSKQPHGCI 115
           D +D GA CT   S+ P TS  P G I
Sbjct: 27  DVDDKGASCTASTSLGPSTSSSPPGII 53


>U28993-2|AAK31497.1|  720|Caenorhabditis elegans Hypothetical
           protein F22D3.2a protein.
          Length = 720

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 38  DFNDNGAECTGDASV-PYTSKQPHGCI 115
           D +D GA CT   S+ P TS  P G I
Sbjct: 27  DVDDKGASCTASTSLGPSTSSSPPGII 53


>AF100662-1|AAC68977.1|  900|Caenorhabditis elegans Hypothetical
           protein H34C03.2 protein.
          Length = 900

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 20  NRDQR-NDFNDNGAECTGDASVPYTSKQPHGCIY*LRR 130
           +R+Q+  DFND+ A  T   + PY S  P+  +Y  R+
Sbjct: 811 DREQKWFDFNDSSANPTYPPAEPYESSDPYILVYRRRK 848


>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical
           protein T01H8.5d protein.
          Length = 1931

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 141 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 230
           LNN +SY  L D+  VG Y A V+   RLE
Sbjct: 422 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 451


>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical
           protein T01H8.5c protein.
          Length = 1971

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 141 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 230
           LNN +SY  L D+  VG Y A V+   RLE
Sbjct: 462 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 491


>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical
           protein T01H8.5a protein.
          Length = 2032

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 141 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 230
           LNN +SY  L D+  VG Y A V+   RLE
Sbjct: 523 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 552


>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
           protein T01H8.5d protein.
          Length = 1931

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 141 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 230
           LNN +SY  L D+  VG Y A V+   RLE
Sbjct: 422 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 451


>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical
           protein T01H8.5c protein.
          Length = 1971

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 141 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 230
           LNN +SY  L D+  VG Y A V+   RLE
Sbjct: 462 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 491


>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical
           protein T01H8.5a protein.
          Length = 2032

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 141 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 230
           LNN +SY  L D+  VG Y A V+   RLE
Sbjct: 523 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 552


>Z78018-2|CAB01447.1|  434|Caenorhabditis elegans Hypothetical
           protein W07G4.2 protein.
          Length = 434

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 87  TPLSNLTVAFINYEELSPLNNINSYEQLYDSVV--VGDYKAAVMKTLRLEN 233
           TP+S+L ++ +  +  S  N + SYE + +SV+    D    +   +RL N
Sbjct: 33  TPVSSLLLSALLNDRNSTTNTLTSYENVQNSVICNFSDINCRLAAGMRLGN 83


>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
           homologous cationchannel protein.
          Length = 1971

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 141 LNNINSYEQLYDSVVVGDYKAAVMKTLRLE 230
           LNN +SY  L D+  VG Y A V+   RLE
Sbjct: 462 LNNRHSYFLLVDNGTVGRYGAEVILRKRLE 491


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,185,826
Number of Sequences: 27780
Number of extensions: 164312
Number of successful extensions: 582
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)