Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_F16
         (539 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF055574-1|AAD11622.1|  434|Homo sapiens placental protein 17b1 ...    31   2.0  
BT007235-1|AAP35899.1|  434|Homo sapiens cargo selection protein...    30   6.0  
BC019278-1|AAH19278.1|  434|Homo sapiens mannose-6-phosphate rec...    30   6.0  
BC007566-1|AAH07566.1|  434|Homo sapiens mannose-6-phosphate rec...    30   6.0  
BC005818-1|AAH05818.1|  434|Homo sapiens mannose-6-phosphate rec...    30   6.0  
BC001590-1|AAH01590.1|  434|Homo sapiens mannose-6-phosphate rec...    30   6.0  
AK223054-1|BAD96774.1|  433|Homo sapiens mannose 6 phosphate rec...    30   6.0  
AK128824-1|BAC87625.1|  706|Homo sapiens protein ( Homo sapiens ...    30   6.0  
AF057140-1|AAC39751.1|  434|Homo sapiens cargo selection protein...    30   6.0  

>AF055574-1|AAD11622.1|  434|Homo sapiens placental protein 17b1
           protein.
          Length = 434

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = +3

Query: 246 HQGLEKMASTAPMLTKENEE-----KVVIVSPNSGGVGKILIREDTIIANIQGCATCGRG 410
           H+GL+K+    PML +  E+     K ++ S  SG    +   +DT+   +       RG
Sbjct: 97  HRGLDKLEENLPMLRQPTEKVLADTKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRG 156

Query: 411 QFTCSGVKNQWSALCWGKQS 470
               SGV    S +  G QS
Sbjct: 157 AVQ-SGVDKTKSVVTGGVQS 175


>BT007235-1|AAP35899.1|  434|Homo sapiens cargo selection protein
           (mannose 6 phosphate receptor binding protein) protein.
          Length = 434

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = +3

Query: 246 HQGLEKMASTAPMLTKENEE-----KVVIVSPNSGGVGKILIREDTIIANIQGCATCGRG 410
           H+GL+K+    P+L +  E+     K ++ S  SG    +   +DT+   +       RG
Sbjct: 97  HRGLDKLEENLPILQQPTEKVLADTKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRG 156

Query: 411 QFTCSGVKNQWSALCWGKQS 470
               SGV    S +  G QS
Sbjct: 157 AVQ-SGVDKTKSVVTGGVQS 175


>BC019278-1|AAH19278.1|  434|Homo sapiens mannose-6-phosphate
           receptor binding protein 1 protein.
          Length = 434

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = +3

Query: 246 HQGLEKMASTAPMLTKENEE-----KVVIVSPNSGGVGKILIREDTIIANIQGCATCGRG 410
           H+GL+K+    P+L +  E+     K ++ S  SG    +   +DT+   +       RG
Sbjct: 97  HRGLDKLEENLPILQQPTEKVLADTKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRG 156

Query: 411 QFTCSGVKNQWSALCWGKQS 470
               SGV    S +  G QS
Sbjct: 157 AVQ-SGVDKTKSVVTGGVQS 175


>BC007566-1|AAH07566.1|  434|Homo sapiens mannose-6-phosphate
           receptor binding protein 1 protein.
          Length = 434

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = +3

Query: 246 HQGLEKMASTAPMLTKENEE-----KVVIVSPNSGGVGKILIREDTIIANIQGCATCGRG 410
           H+GL+K+    P+L +  E+     K ++ S  SG    +   +DT+   +       RG
Sbjct: 97  HRGLDKLEENLPILQQPTEKVLADTKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRG 156

Query: 411 QFTCSGVKNQWSALCWGKQS 470
               SGV    S +  G QS
Sbjct: 157 AVQ-SGVDKTKSVVTGGVQS 175


>BC005818-1|AAH05818.1|  434|Homo sapiens mannose-6-phosphate
           receptor binding protein 1 protein.
          Length = 434

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = +3

Query: 246 HQGLEKMASTAPMLTKENEE-----KVVIVSPNSGGVGKILIREDTIIANIQGCATCGRG 410
           H+GL+K+    P+L +  E+     K ++ S  SG    +   +DT+   +       RG
Sbjct: 97  HRGLDKLEENLPILQQPTEKVLADTKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRG 156

Query: 411 QFTCSGVKNQWSALCWGKQS 470
               SGV    S +  G QS
Sbjct: 157 AVQ-SGVDKTKSVVTGGVQS 175


>BC001590-1|AAH01590.1|  434|Homo sapiens mannose-6-phosphate
           receptor binding protein 1 protein.
          Length = 434

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = +3

Query: 246 HQGLEKMASTAPMLTKENEE-----KVVIVSPNSGGVGKILIREDTIIANIQGCATCGRG 410
           H+GL+K+    P+L +  E+     K ++ S  SG    +   +DT+   +       RG
Sbjct: 97  HRGLDKLEENLPILQQPTEKVLADTKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRG 156

Query: 411 QFTCSGVKNQWSALCWGKQS 470
               SGV    S +  G QS
Sbjct: 157 AVQ-SGVDKTKSVVTGGVQS 175


>AK223054-1|BAD96774.1|  433|Homo sapiens mannose 6 phosphate
           receptor binding protein 1 variant protein.
          Length = 433

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = +3

Query: 246 HQGLEKMASTAPMLTKENEE-----KVVIVSPNSGGVGKILIREDTIIANIQGCATCGRG 410
           H+GL+K+    P+L +  E+     K ++ S  SG    +   +DT+   +       RG
Sbjct: 97  HRGLDKLEENLPILQQPTEKVLADTKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRG 156

Query: 411 QFTCSGVKNQWSALCWGKQS 470
               SGV    S +  G QS
Sbjct: 157 AVQ-SGVDKTKSVVTGGVQS 175


>AK128824-1|BAC87625.1|  706|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46160 fis, clone TESTI4002141. ).
          Length = 706

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 375 ANIQGCATCGRGQFTCSGVKNQWSALCWG 461
           A++  C   G  Q  C  ++ +W+A CWG
Sbjct: 659 ASVSECCVPGDAQGGCVSIRVRWAAGCWG 687


>AF057140-1|AAC39751.1|  434|Homo sapiens cargo selection protein
           TIP47 protein.
          Length = 434

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = +3

Query: 246 HQGLEKMASTAPMLTKENEE-----KVVIVSPNSGGVGKILIREDTIIANIQGCATCGRG 410
           H+GL+K+    P+L +  E+     K ++ S  SG    +   +DT+   +       RG
Sbjct: 97  HRGLDKLEENLPILQQPTEKVLADTKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRG 156

Query: 411 QFTCSGVKNQWSALCWGKQS 470
               SGV    S +  G QS
Sbjct: 157 AVQ-SGVDKTKSVVTGGVQS 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,735,454
Number of Sequences: 237096
Number of extensions: 1530455
Number of successful extensions: 6190
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6190
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)