Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_F15
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 33 0.25
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 33 0.25
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 33 0.25
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 33 0.25
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 30 1.7
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 30 1.7
AF047656-12|AAC05111.1| 168|Caenorhabditis elegans Hypothetical... 30 1.7
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical pr... 28 7.0
U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 27 9.3
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 307 CNQICGCDRAYVFNETTHECDLDMEYILKTASMQMSEEKSGY 432
C Q+C C + + TT EC + Y KT S + + K GY
Sbjct: 685 CQQVCSCADGHGCDPTTGECICEPGYHGKTCSEKCPDGKYGY 726
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 307 CNQICGCDRAYVFNETTHECDLDMEYILKTASMQMSEEKSGY 432
C Q+C C + + TT EC + Y KT S + + K GY
Sbjct: 685 CQQVCSCADGHGCDPTTGECICEPGYHGKTCSEKCPDGKYGY 726
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 307 CNQICGCDRAYVFNETTHECDLDMEYILKTASMQMSEEKSGY 432
C Q+C C + + TT EC + Y KT S + + K GY
Sbjct: 685 CQQVCSCADGHGCDPTTGECICEPGYHGKTCSEKCPDGKYGY 726
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 307 CNQICGCDRAYVFNETTHECDLDMEYILKTASMQMSEEKSGY 432
C Q+C C + + TT EC + Y KT S + + K GY
Sbjct: 685 CQQVCSCADGHGCDPTTGECICEPGYHGKTCSEKCPDGKYGY 726
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 304 DCNQICGCDRAYVFNETTHECDLDMEYILKTASMQMSEEKSG 429
DCNQ+C C+ V + +T C YI + ++ G
Sbjct: 1338 DCNQLCSCENGGVCDSSTGSCVCPPGYIGTKCEIACQSDRFG 1379
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 304 DCNQICGCDRAYVFNETTHECDLDMEYILKTASMQMSEEKSG 429
DCNQ+C C+ V + +T C YI + ++ G
Sbjct: 1338 DCNQLCSCENGGVCDSSTGSCVCPPGYIGTKCEIACQSDRFG 1379
>AF047656-12|AAC05111.1| 168|Caenorhabditis elegans Hypothetical
protein F17E9.2 protein.
Length = 168
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 49 FFFIHSQKFEKLFLKP*YKLLRELSVLVVNCNEIKMCYKVLICYIFYFLI 198
FF HS KF++ FL+ YK +N + ++ CY I++FLI
Sbjct: 127 FFVFHSVKFQRYFLQKGYKF--------INNSRMRCCYFYNEILIYWFLI 168
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 280 EQDIDSTTDCNQICGCDRAYVFNETTHECDLDMEYILKTASMQMSEEKSGY 432
E D+DS DC C C Y+ N ++C + ++ KT ++ Y
Sbjct: 258 EHDVDSVNDCR--CLCAATYLPNNKKNKC-MSFQFRNKTCTLNKGNHLGQY 305
>Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical
protein T26C5.2 protein.
Length = 524
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 262 SLNLNHEQDIDSTTDCNQIC---GCDRAYVFNETTHECDL 372
S N++ + ++ + +C +IC C R+Y + E TH C L
Sbjct: 324 SENVDIDSNVPNKRECEKICKEKNC-RSYTYFEKTHTCHL 362
>U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical
protein C56E6.5 protein.
Length = 595
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 642 FLS*CXNVLLQFTITIINMTAVNTSTNSTETCTRHK*YYGNYDPFEY 502
+L C N+++ TI I+ T T + + Y G +PF Y
Sbjct: 467 YLKNCSNIVILQTIIILAFFVSGNGVTGTTTSSSIQYYIGVINPFNY 513
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,258,161
Number of Sequences: 27780
Number of extensions: 260530
Number of successful extensions: 710
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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