Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_F14
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 107 7e-24
AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 107 7e-24
L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 80 1e-15
AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 80 1e-15
AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 78 6e-15
AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical... 29 2.9
Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 5.1
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 5.1
U49831-9|AAA93410.1| 63|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical ... 28 6.8
>L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein.
Length = 152
Score = 107 bits (257), Expect = 7e-24
Identities = 58/152 (38%), Positives = 91/152 (59%), Gaps = 5/152 (3%)
Frame = +2
Query: 50 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGGRNAEYDSFLEDLQK- 223
MASGV V +CK Y+ + +H Y++F I +++ I VE VG +NA Y F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 224 -GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 400
ECRY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK S
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120
Query: 401 LVGVQK--YIQATDLSEASQEAVEEKLRATDR 490
L G++ +QA+++S+ +++V+ L + R
Sbjct: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151
>AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated
protein 60, isoform c protein.
Length = 152
Score = 107 bits (257), Expect = 7e-24
Identities = 58/152 (38%), Positives = 91/152 (59%), Gaps = 5/152 (3%)
Frame = +2
Query: 50 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGGRNAEYDSFLEDLQK- 223
MASGV V +CK Y+ + +H Y++F I +++ I VE VG +NA Y F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 224 -GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 400
ECRY D E T Q QG S K+ + +CPD A V+++MLY+SS ALK S
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120
Query: 401 LVGVQK--YIQATDLSEASQEAVEEKLRATDR 490
L G++ +QA+++S+ +++V+ L + R
Sbjct: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151
>L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein.
Length = 165
Score = 80.2 bits (189), Expect = 1e-15
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 18/160 (11%)
Frame = +2
Query: 50 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETV--------------GGR 184
M+SGV V +T+++++ + +K +RY++F I DE ++ VE
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 185 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 358
A +D F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118
Query: 359 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 475
KM+Y+SS A+K SL G Q +D SE S + + KL
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158
>AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated
protein 60, isoform a protein.
Length = 165
Score = 80.2 bits (189), Expect = 1e-15
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 18/160 (11%)
Frame = +2
Query: 50 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETV--------------GGR 184
M+SGV V +T+++++ + +K +RY++F I DE ++ VE
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 185 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 358
A +D F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118
Query: 359 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQEAVEEKL 475
KM+Y+SS A+K SL G Q +D SE S + + KL
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158
>AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated
protein 60, isoform b protein.
Length = 212
Score = 77.8 bits (183), Expect = 6e-15
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 18/154 (11%)
Frame = +2
Query: 50 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETV--------------GGR 184
M+SGV V +T+++++ + +K +RY++F I DE ++ VE
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 185 NAEYDSFLEDLQK--GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKK 358
A +D F+ED++ +CRY +FDF++T G SK K+ + CPD A +KK
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAG-TSKMDKIIFLQICPDGASIKK 118
Query: 359 KMLYSSSFDALKKSL-VGVQKYIQATDLSEASQE 457
KM+Y+SS A+K SL G Q +D SE S +
Sbjct: 119 KMVYASSAAAIKTSLGTGKILQFQVSDESEMSHK 152
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +2
Query: 275 QCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK--YIQATDLSEA 448
Q SE S K+ L++ CPD A V+++MLY+SS ALK SL G++ +QA+++S+
Sbjct: 142 QVSDESEMSHKE---LLNNCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDL 197
Query: 449 SQEAVEEKLRATDR 490
+++V+ L + R
Sbjct: 198 DEKSVKSDLMSNQR 211
>AC024801-11|AAN84814.2| 138|Caenorhabditis elegans Hypothetical
protein Y50D7A.10 protein.
Length = 138
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +2
Query: 278 CQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQE 457
C+ S+ + L+ +CP+ + + +MLY+ S + + V K + D+ E E
Sbjct: 74 CKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNE-CHVSKNTEIRDIDEIDDE 132
Query: 458 AVEEK 472
+E K
Sbjct: 133 LLESK 137
>Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical
protein T02G6.2 protein.
Length = 314
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 486 TVSESDAFSSPLNSPLTHTLRTTRARPLVTYRGSRPAPPN 605
T + ++ S L HT+R+T P+V RP PP+
Sbjct: 148 TANSANGVSLTLPRVKNHTIRSTDTVPIVRVPAGRPRPPS 187
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 501 DAFSSPLNSPLTHTLRTTRARPLVTYRGSRPAPP 602
D + P++ P T T P VT R +RP PP
Sbjct: 678 DEYDVPMDFPDTEAPPLTTRPPPVTVRNTRPPPP 711
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 501 DAFSSPLNSPLTHTLRTTRARPLVTYRGSRPAPP 602
D + P++ P T T P VT R +RP PP
Sbjct: 678 DEYDVPMDFPDTEAPPLTTRPPPVTVRNTRPPPP 711
>U49831-9|AAA93410.1| 63|Caenorhabditis elegans Hypothetical
protein F10C1.1 protein.
Length = 63
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 575 CDKGPRTRRS*RVCEGGVEGRAKCIG 498
C +GP T RS +CE GV R +G
Sbjct: 18 CSRGPPTGRSSTLCEEGVGERGVTVG 43
>AC024792-3|AAF60684.2| 388|Caenorhabditis elegans Hypothetical
protein Y48G1A.3 protein.
Length = 388
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 266 YTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLY 370
+ H G+ E + +F S PD+ K KKK+LY
Sbjct: 161 FIHSLCGSHEIHPVKIIFRFSKYPDSLKYKKKILY 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,033,208
Number of Sequences: 27780
Number of extensions: 324020
Number of successful extensions: 1294
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -