Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_F04
(625 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0012 - 7346282-7347136,7347234-7347593 71 8e-13
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 66 2e-11
11_01_0767 + 6438648-6438809,6439146-6440000 65 5e-11
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 62 3e-10
11_02_0011 - 7337618-7338496,7338596-7338991 59 3e-09
11_01_0750 - 6315126-6315896,6316371-6316784 56 2e-08
01_06_0824 - 32243495-32244319,32244449-32244859 56 2e-08
11_02_0014 - 7352619-7352918,7353173-7353418 53 2e-07
11_01_0771 + 6453130-6454488 52 4e-07
04_04_0619 + 26652923-26653267,26653440-26654273 52 5e-07
01_01_1152 + 9170628-9171899 44 1e-04
04_04_0620 + 26656072-26656417,26656585-26657396 30 1.7
05_04_0193 + 18939869-18939988,18940714-18941012,18941078-189411... 27 9.2
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 70.9 bits (166), Expect = 8e-13
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 29/225 (12%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTPSELDG-VLLVLIDALYFKGNWRVLFPYENTESSPFYNTKGN 213
IN +V AT++ I EI+ + G LVL++A+YFKG W FP E T + F+ G+
Sbjct: 128 INKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGS 187
Query: 214 QIGNVNLMYVTGTFNMTSVEQIGARVLELP---------------------YGDDNRYSM 330
+V+ +++ + G +VL+LP YG++ SM
Sbjct: 188 ---SVDAPFMSSREDQYIGFYDGFKVLKLPYHRTMKNHGDGGDITPAILKHYGENVGLSM 244
Query: 331 LLFLPYTSTTVSSVIDNLKRVPLSSIFTLF------AKRTADEVIVQIPRFKIVSDINNL 492
+FLP + +++D + + + F +R +++PRFK VS + +
Sbjct: 245 YIFLPDARDGLPALVDKMAVASSGTASSSFLRDHRPGRRRIKVGDLRVPRFK-VSFYSEM 303
Query: 493 KELLTDMGLKTMFDSGRAKFSGISEYQ-IYVSNLIQKAHIEVTEE 624
E+L MG+ FD G+ SG+ + + + V ++ +A +EV EE
Sbjct: 304 NEVLKGMGIGAAFDVGKVDLSGMIDGELVVVEKVMHRAVVEVNEE 348
>03_05_0293 + 22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 66.5 bits (155), Expect = 2e-11
Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 7/203 (3%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTPSELD-GVLLVLIDALYFKGNWRVLFPYENTESSPFYNTKGN 213
+N +V T I I TP ++ LVL +ALYFKG W F TE F+ G
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGE 528
Query: 214 QIGNVNLMYVTGTFNMTSVEQIGARVLELPY---GDDNRYSMLLFLPYTSTTVSSVIDNL 384
+ M ++S + + +VL+LPY GD ++SM + LP + S+ + L
Sbjct: 529 SV-QAPFMSTRKKQYLSSYDSL--KVLKLPYLQGGDKRQFSMYILLPEAQDGLWSLAEKL 585
Query: 385 KRVPLSSIFTLFAKRTADEVIVQIPRFKIVSDINNLKELLTDMGLKTMFDSGRAKFSGIS 564
P + R ++P+FKI LL +GL +F S +
Sbjct: 586 NSEP-EFMENHIPMRPVHVGQFKLPKFKISFGF-GASGLLKGLGLPLLFGSEVDLIEMVD 643
Query: 565 E---YQIYVSNLIQKAHIEVTEE 624
++VS++ K+ IEV EE
Sbjct: 644 SPGAQNLFVSSVFHKSFIEVNEE 666
Score = 66.1 bits (154), Expect = 2e-11
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 7/203 (3%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTPSELDGVL-LVLIDALYFKGNWRVLFPYENTESSPFYNTKGN 213
+N +V T I EI+ P +D LVL +ALYFKG W F T+ F+ G
Sbjct: 217 VNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLLDGK 276
Query: 214 QIGNVNLMYVTGTFNMTSVEQIGARVLELPY---GDDNRYSMLLFLPYTSTTVSSVIDNL 384
+V +++ + + +VL+LPY GD ++SM + LP + S+ + L
Sbjct: 277 ---SVQAPFMSTSKKQYILSYDNLKVLKLPYQQGGDKRQFSMYILLPEAQDGLWSLAEKL 333
Query: 385 KRVPLSSIFTLFAKRTADEVIVQIPRFKIVSDINNLKELLTDMGLKTMFDSGRAKFSGIS 564
P + R ++P+FKI +LL +GL F S +
Sbjct: 334 NSEP-EFLEKHIPTRQVTVGQFKLPKFKISFGF-EASDLLKSLGLHLPFSSEADLTEMVD 391
Query: 565 EYQ---IYVSNLIQKAHIEVTEE 624
+ ++VS++ K+ +EV EE
Sbjct: 392 SPEGKNLFVSSVFHKSFVEVNEE 414
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 64.9 bits (151), Expect = 5e-11
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTP-SELDGVLLVLIDALYFKGNWRVLFPYENTESSPFYNTKGN 213
IN +V AT I E++ P S+ V+ +A+YFKG W F +T F G+
Sbjct: 62 INAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREFRRLDGS 121
Query: 214 QIGNVNLMYVTGTFNMTSVEQIGARVLELPYGDDN-------RYS-----MLLFLPYTST 357
+ + +G+++ + G RVL LPY + RYS ML+FLP
Sbjct: 122 SVEVPFMQRPSGSYHHVACHD-GFRVLRLPYKATSDTYNLKLRYSLPSFAMLVFLPDDRD 180
Query: 358 TVSSVIDNLKRVPLSSIFTLFAKRTADEVIVQIPRFKIVSDINNLKELLTDMGLKTMFDS 537
+ ++D + P + ++P+FK+ + ++L +GL+ FD
Sbjct: 181 GLPGLLDRITASP-EFVDEHLPPGCVPVGRFRVPKFKLAFCHYGIADVLRGLGLRLPFDM 239
Query: 538 GRAKFSGIS------EYQIYVSNLIQKAHIEVTEE 624
A+ SGI+ + ++VS++I K +EV EE
Sbjct: 240 FAAEMSGIAVEGDGEDAAMFVSSVIHKVVVEVNEE 274
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 62.5 bits (145), Expect = 3e-10
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 8/204 (3%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTPSELDGVL-LVLIDALYFKGNWRVLFPYENTESSPFYNTKGN 213
+N +V T I EI+ P +D LVL +ALYFKG W F T+ F G
Sbjct: 9 VNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLLDGK 68
Query: 214 QIGNVNLMYVTGTFNMTSVEQIGARVLELPY--GDDNR-YSMLLFLPYTSTTVSSVIDNL 384
+ M + ++S + + +VL+LPY G D R +SM + LP + S+ L
Sbjct: 69 SV-LAPFMSTSKKQYLSSYDSL--KVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKL 125
Query: 385 KRVPLSSIFTLFAKRTADEVIVQIPRFKIVSDINNLKELLTDMGLKTMFDSGRAKFSGI- 561
P + R ++P+FKI +LL +GL+ F S +A +G+
Sbjct: 126 NSEP-EFLEKRIPTRQVTVGKFKLPKFKISFGF-EASDLLKILGLQLPF-SSKADLTGMV 182
Query: 562 ---SEYQIYVSNLIQKAHIEVTEE 624
+ ++VS+L K+ ++V EE
Sbjct: 183 GSPERHNLFVSSLFHKSFVQVDEE 206
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 58.8 bits (136), Expect = 3e-09
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTPSELD-GVLLVLIDALYFKGNWRVLFPYENTESS-------- 189
IN +V AT++ I EI+ + LVL++A+YFKG W FP +T +
Sbjct: 140 INKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGS 199
Query: 190 ----PFYNTKGNQ-IGN------VNLMYVTGTF-------NMTSVEQIGARVLELPYGDD 315
PF +++ +Q IG + L Y T + + I +LE G++
Sbjct: 200 SVDVPFMSSREDQYIGFHDGFTVLKLPYHHRTMKNHGDGGDTITNSSITRAILEHYGGEN 259
Query: 316 NRYSMLLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAKRTADEVI--VQIPRFKIVSDINN 489
SM +FLP + +++D + SS F + T + +++PRFK VS +
Sbjct: 260 VGLSMYIFLPDERDGLPALVDKMAASSSSSSFLRDHRPTRRREVGDLRVPRFK-VSFYSQ 318
Query: 490 LKELLTDMGLKTMFDSGRAKFSGISE------YQIYVSNLIQKAHIEVTEE 624
+ +L MG+ FD+G A SG++E + V + +A +EV EE
Sbjct: 319 INGVLQGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNEE 369
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 56.4 bits (130), Expect = 2e-08
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTPSELD-GVLLVLIDALYFKGNWRVLFPYENTESSPFYNTKGN 213
IN +V+ +T + ++ +D LVL ALYF+G W T FY G
Sbjct: 146 INSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGT 205
Query: 214 QIGNVNLMYVTGTFNMTSVEQIGARVLELPY---GDDNRYSMLLFLPYTSTTVSSVIDNL 384
+V + +V +V++LPY ++ ++SM +FLP + + +
Sbjct: 206 ---SVEVPFVEYDRTRLFAVHDNFKVIKLPYKQGKNERKFSMYIFLPDDHDGLFELTQKI 262
Query: 385 KRVPLSSIFTLFAKRTADEVIVQIPRFKIVSDINNLKELLTDMGLKTMFDSGRAKFSGI- 561
P+ L ++ V + +P FKI I ++K+ L DMGL+ F A+FS +
Sbjct: 263 FSEPMFLEQHLPTEKC--HVGISVPNFKISFQI-DVKDFLKDMGLELPF-LREAEFSDMI 318
Query: 562 ----SEYQIYVSNLIQKAHIEVTEE 624
S +++S+++ KA +EV ++
Sbjct: 319 KEDDSSGPLFLSDVLHKAVLEVDQK 343
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 56.0 bits (129), Expect = 2e-08
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTPSELDGVL-LVLIDALYFKGNWRVLFPYENTESSPFYNTKGN 213
IN++ SAT I + + +D VL +ALYFKG+W F +T FY G
Sbjct: 145 INEWFESATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDG- 203
Query: 214 QIGNVNLMYVTGTFNMTSVEQIGARVLELPYGDDNR---------YSMLLFLPYTSTTVS 366
G+V+ +++ + G +VL LPY R +SM ++LP +
Sbjct: 204 --GHVSAPFMSSGKWQYIACRAGYKVLRLPYARGGRGRGRDTGRLFSMYIYLPDERHGLP 261
Query: 367 SVIDNLKRVPLSSIFTLFAKRTADEV-IVQIPRFKIVSDINNLKELLTDMGLKTMFDSGR 543
++ L P + I + A V +PRF + S N E L +GL+ F+
Sbjct: 262 DMLRKLCSDPAALIESSAALTEKVPVGAFMVPRFTL-SYKTNAAETLRQLGLRLPFEYPG 320
Query: 544 AKFSGISE-----YQIYVSNLIQKAHIEVTEE 624
A S + E +I VS + ++ +EV EE
Sbjct: 321 ADLSEMVESSPEAEKIVVSAVYHESFVEVNEE 352
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTPSELDGVL-LVLIDALYFKGNWRVLFPYENTESSPFYNTKGN 213
IN++V AT++ I EI+ + + LVL++A+YFKG W FP E+T + F+ G+
Sbjct: 90 INEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLDGS 149
Query: 214 QIGNVNLMYVTGTFNMTSVEQIGARVLELPY 306
+VN+ ++ + G VL+LPY
Sbjct: 150 ---SVNVRFMRSREDQYIGFYDGFNVLKLPY 177
>11_01_0771 + 6453130-6454488
Length = 452
Score = 52.0 bits (119), Expect = 4e-07
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 27/223 (12%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTPSELDG-VLLVLIDALYFKGNWRVLFPYENTESSPFYNTKGN 213
IN + R AT + I +++ P + +VL +A+YFKG W F +TE PFY G
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFYRHDGA 236
Query: 214 QIGN--VNLMYVTGTFNMTSVEQIGARVLELPY-------------------GDDNRYSM 330
++ Y++ G +VL+L Y G+ RY+M
Sbjct: 237 AAAAAVADVPYMSSRSYQRVAVHDGFKVLKLRYRSPRLLRDKRKRGGGGDVGGEFTRYAM 296
Query: 331 LLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAKRTADEVIVQIPRFKIVSDINNLKELLTD 510
+FLP + +++ + P + A ++P+FK VS ++ L
Sbjct: 297 AIFLPDARDGLRGLVERMASRPGFLHEHMPAAWPVPVGEFRVPKFK-VSCGGSVVGALEQ 355
Query: 511 MGLKTMFDSGRAKFSGISE-----YQIYVSNLIQKAHIEVTEE 624
+GL+ F A S + E + ++V ++ KA IEV EE
Sbjct: 356 LGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIEVNEE 398
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 51.6 bits (118), Expect = 5e-07
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 18/214 (8%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTPSEL-DGVLLVLIDALYFKGNWRVLFPYENTESSPFYNTKGN 213
+N F+ AT+ ++ ++P VL +A++FK W F +T+ F+ G
Sbjct: 123 VNRFISQATNGRLNNTISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGT 182
Query: 214 QIGNVNLMYVTGTFNMTSVEQIGARVLELPY---GDDNR-------YSMLLFLPYTSTTV 363
++ V + T + +G +VL+L Y G D + + ML+FLP +
Sbjct: 183 RV-TVPFLSDPRTHYAARFDGLGFKVLQLFYKMVGHDGQVHFGAPCFCMLVFLPIKRDGL 241
Query: 364 SSVIDNLKRVPLSSIFTLFAKRTADEVI-VQIPRFKIVSDINNLKELLTDMGLKTMFDSG 540
++ P R+ EV +P+FK S+++ + L +GL FD
Sbjct: 242 RHLLRMAVTEP--DFVMRCVPRSEQEVSPCMVPKFKFSSELD-ARGALAKLGLGAPFDPL 298
Query: 541 RAKFSGIS------EYQIYVSNLIQKAHIEVTEE 624
A S ++ ++YVS + QK +EV EE
Sbjct: 299 AADLSRMAVSVNTPPERLYVSAMRQKCAVEVDEE 332
>01_01_1152 + 9170628-9171899
Length = 423
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +1
Query: 37 INDFVRSATHEAIDEIVTPSELDG-VLLVLIDALYFKGNWRVLFPYENTESSPFYNTKGN 213
+N FV AT I +++ P+ +D ++VL +A++FKG W + F T +PF+ G
Sbjct: 163 VNAFVSDATEGLIRDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGG 222
Query: 214 QIGNVNLMYVTGTFNMTSVEQIGARVLELPY 306
+ M F G L+LPY
Sbjct: 223 AV-RAPFMTTEIPFERHVAAFPGFTALKLPY 252
>04_04_0620 + 26656072-26656417,26656585-26657396
Length = 385
Score = 29.9 bits (64), Expect = 1.7
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Frame = +1
Query: 322 YSMLLFLPYTSTTVSSVIDNLKRVPLSSIFTLFAKRTADEVI-VQIPRFKIVSDINNLKE 498
+ ML+FLP + ++ P T R+ V ++P+FK S ++
Sbjct: 221 FCMLVFLPIKRDGLRHLLRMAVTEP--DFVTRCVPRSRQIVTPCKVPKFKFSSQLD-AGG 277
Query: 499 LLTDMGLKTMFDSGRAKFSGISEYQ----IYVSNLIQKAHIEVTEE 624
L +GL FD A S ++ +YVS + QK +EV EE
Sbjct: 278 ALAQLGLGAPFDPDAADLSRMAVNTPPAGLYVSTMRQKCAVEVDEE 323
>05_04_0193 +
18939869-18939988,18940714-18941012,18941078-18941186,
18941874-18941999,18942178-18942218,18942614-18942744,
18943218-18943291,18944215-18944450,18944543-18944863,
18945023-18945086
Length = 506
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 70 AIDEIVTPSEL-DGVLLVLIDALYFKGNWRVLFPYENTE 183
A+ EI EL D ++ LIDA +KGN ++F + T+
Sbjct: 63 ALREIKLLKELKDSNIIELIDAFPYKGNLHLVFEFMETD 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,913,679
Number of Sequences: 37544
Number of extensions: 281427
Number of successful extensions: 529
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -