Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_F02
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82096-7|CAB05033.2| 332|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z79756-1|CAB02120.2| 494|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z66519-6|CAA91374.3| 394|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81557-14|CAN99712.1| 321|Caenorhabditis elegans Hypothetical p... 27 10.0
Z81557-13|CAB04530.2| 303|Caenorhabditis elegans Hypothetical p... 27 10.0
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 27 10.0
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 27 10.0
AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical ... 27 10.0
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 27 10.0
>Z82096-7|CAB05033.2| 332|Caenorhabditis elegans Hypothetical
protein ZK909.5 protein.
Length = 332
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 309 YSAKDYDTFYKTTVYMKDRVNQDLYIYVLST 401
YS Y +K+ +Y K+R NQ+ YI V+ +
Sbjct: 69 YSETQYWYTFKSDIYRKERTNQEGYIEVMKS 99
>Z79756-1|CAB02120.2| 494|Caenorhabditis elegans Hypothetical
protein F53C11.1 protein.
Length = 494
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 219 KQNWLLPLSVPFSPLNPTHQFEAVIMFNV 305
KQN+ V F+PL PTH + V+ ++V
Sbjct: 280 KQNFPGEKFVSFTPLTPTHAYSNVLAYSV 308
>Z66519-6|CAA91374.3| 394|Caenorhabditis elegans Hypothetical
protein B0334.6 protein.
Length = 394
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 237 PLSVPFSPLNPTHQFEAVIMFNVLYSAKDYDTFYKTTVYMKDRVNQDLYIYVLSTLHIHR 416
PLS+P + + F VLY TFYK++V + N + Y+ V+ L+ HR
Sbjct: 102 PLSIPSLAFSTS--FNHFYSRIVLYIRTLASTFYKSSVLIVVAFNIERYLCVVCPLNSHR 159
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 154 LQLAEIVIDFET*FGSRA-WKYNKEISIC 71
+Q +I+ DFE FGSR WK E IC
Sbjct: 1296 VQKFQIISDFENYFGSRGLWKNYLEAMIC 1324
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 154 LQLAEIVIDFET*FGSRA-WKYNKEISIC 71
+Q +I+ DFE FGSR WK E IC
Sbjct: 1296 VQKFQIISDFENYFGSRGLWKNYLEAMIC 1324
>Z81557-14|CAN99712.1| 321|Caenorhabditis elegans Hypothetical
protein F59A1.11b protein.
Length = 321
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 198 KIWILMKKQNWLL-PLSVPFSPLNPTHQFEAVIMFNVLYSAKDYDTFYK 341
+++I+ KK LL +++P + P +AVI + V+ S +D + F+K
Sbjct: 137 RLFIIKKKSLVLLYSIAIPLMLIGPIS--DAVIAYPVILSGQDMNVFFK 183
>Z81557-13|CAB04530.2| 303|Caenorhabditis elegans Hypothetical
protein F59A1.11a protein.
Length = 303
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 198 KIWILMKKQNWLL-PLSVPFSPLNPTHQFEAVIMFNVLYSAKDYDTFYK 341
+++I+ KK LL +++P + P +AVI + V+ S +D + F+K
Sbjct: 137 RLFIIKKKSLVLLYSIAIPLMLIGPIS--DAVIAYPVILSGQDMNVFFK 183
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 21 GLCDPVRTDDSVEFAKKQIDISLLYF 98
G+ P+ DD EF++K DI Y+
Sbjct: 30 GVSSPMENDDEPEFSQKHYDIEPCYY 55
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 21 GLCDPVRTDDSVEFAKKQIDISLLYF 98
G+ P+ DD EF++K DI Y+
Sbjct: 30 GVSSPMENDDEPEFSQKHYDIEPCYY 55
>AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical
protein Y47H9C.1 protein.
Length = 377
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 300 NVLYSAKDYDTFYKTTVYMKDRVNQDLYIYVLSTLHIHRSDLEGYAI-PPIY 452
N+ SA+ DT + +VY+ N + ++ + +++GY + PP Y
Sbjct: 42 NIYISAQSDDTSFLASVYIVTAKNSKSLLNIMQDNLQNTGEIQGYPVDPPAY 93
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 21 GLCDPVRTDDSVEFAKKQIDISLLYF 98
G+ P+ DD EF++K DI Y+
Sbjct: 30 GVSSPMENDDEPEFSQKHYDIEPCYY 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,903,187
Number of Sequences: 27780
Number of extensions: 298324
Number of successful extensions: 768
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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