Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_E21
(411 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 26 0.19
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 1.0
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 1.4
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 2.4
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 2.4
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 3.1
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 3.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 3.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 5.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 5.4
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 20 9.5
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 25.8 bits (54), Expect = 0.19
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 205 FKWGLVI-AGLGDLNRPVESLSIPQSASLAATGLIWSRYSLVII 333
F WG+++ +G+G+ P+S S G++W+ ++++I+
Sbjct: 616 FAWGVLLNSGIGE--------GTPRSFSARVLGMVWAGFAMIIV 651
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.4 bits (48), Expect = 1.0
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -1
Query: 201 WSPEEYCFWDLLHAPIADEFLMEQICQSM**GLYRFS--TFSNYEGVGRVFW 52
W+P++Y D LH P +L + + + G Y + T + G+V W
Sbjct: 84 WNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVW 135
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 1.4
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 201 WSPEEYCFWDLLHAPIADEFLMEQICQSM**GLYRFS--TFSNYEGVGRVFW 52
W+PEEY ++L+ P + +L + + + G Y + T + + G V W
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGDVSW 148
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.2 bits (45), Expect = 2.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 201 WSPEEYCFWDLLHAP 157
W P+EY ++LH P
Sbjct: 88 WDPKEYGGVEMLHVP 102
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 22.2 bits (45), Expect = 2.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 80 IMRELEGSSGFTIFMLIRIYMTSLL 6
++++L G + IF+LIR SLL
Sbjct: 123 LLKKLYGGNSTIIFLLIRFKSFSLL 147
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 3.1
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 375 GDEYVYSKQTIIFRY 331
G+EY+YS + ++ RY
Sbjct: 256 GEEYLYSHKLLLNRY 270
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 3.1
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 375 GDEYVYSKQTIIFRY 331
G+EY+YS + ++ RY
Sbjct: 256 GEEYLYSHKLLLNRY 270
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 3.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 108 GLYRFSTFSNYEGVGRVFWVYY 43
GL++ NYE +GR YY
Sbjct: 501 GLHKNKPDMNYETMGRALRYYY 522
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 201 WSPEEYCFWDLLHAP 157
W P+EY +LH P
Sbjct: 92 WEPKEYGGVKMLHVP 106
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.0 bits (42), Expect = 5.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 201 WSPEEYCFWDLLHAP 157
W P+EY +LH P
Sbjct: 92 WEPKEYGGVKMLHVP 106
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 20.2 bits (40), Expect = 9.5
Identities = 5/24 (20%), Positives = 13/24 (54%)
Frame = -1
Query: 102 YRFSTFSNYEGVGRVFWVYYFYVN 31
Y++S ++NY + + + +N
Sbjct: 89 YKYSNYNNYNNYNKKLYYKNYIIN 112
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,271
Number of Sequences: 438
Number of extensions: 2627
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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