Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_E17
(445 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093865-1|AAH93865.1| 446|Homo sapiens SRY (sex determining re... 31 1.8
BC093863-1|AAH93863.1| 446|Homo sapiens SRY (sex determining re... 31 1.8
AL121875-3|CAB87584.1| 446|Homo sapiens SRY (sex determining re... 31 1.8
AF264713-1|AAF73059.1| 446|Homo sapiens sex determining region ... 31 1.8
AK056313-1|BAB71146.1| 618|Homo sapiens protein ( Homo sapiens ... 31 2.4
BC063620-1|AAH63620.1| 488|Homo sapiens AGRN protein protein. 29 7.2
BC007649-1|AAH07649.1| 488|Homo sapiens AGRN protein protein. 29 7.2
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 29 7.2
AK055799-1|BAB71019.1| 517|Homo sapiens protein ( Homo sapiens ... 29 7.2
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 29 7.2
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 29 7.2
U79458-1|AAD10951.1| 268|Homo sapiens WW domain binding protein... 29 9.6
BC010616-1|AAH10616.1| 261|Homo sapiens WW domain binding prote... 29 9.6
BC007452-1|AAH07452.1| 261|Homo sapiens WW domain binding prote... 29 9.6
AF087866-1|AAP97175.1| 261|Homo sapiens WW-domain binding prote... 29 9.6
>BC093865-1|AAH93865.1| 446|Homo sapiens SRY (sex determining
region Y)-box 3 protein.
Length = 446
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 280 PPAHTRDPPPMAAQDMHRFPMAG 212
PP+ + PPP A MHR+ MAG
Sbjct: 284 PPSMSSPPPPPALPPMHRYDMAG 306
>BC093863-1|AAH93863.1| 446|Homo sapiens SRY (sex determining
region Y)-box 3 protein.
Length = 446
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 280 PPAHTRDPPPMAAQDMHRFPMAG 212
PP+ + PPP A MHR+ MAG
Sbjct: 284 PPSMSSPPPPPALPPMHRYDMAG 306
>AL121875-3|CAB87584.1| 446|Homo sapiens SRY (sex determining
region Y)-box 3 protein.
Length = 446
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 280 PPAHTRDPPPMAAQDMHRFPMAG 212
PP+ + PPP A MHR+ MAG
Sbjct: 284 PPSMSSPPPPPALPPMHRYDMAG 306
>AF264713-1|AAF73059.1| 446|Homo sapiens sex determining region Y
box 3 protein.
Length = 446
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 280 PPAHTRDPPPMAAQDMHRFPMAG 212
PP+ + PPP A MHR+ MAG
Sbjct: 284 PPSMSSPPPPPALPPMHRYDMAG 306
>AK056313-1|BAB71146.1| 618|Homo sapiens protein ( Homo sapiens
cDNA FLJ31751 fis, clone NT2RI2007439, weakly similar to
ZINC FINGER PROTEIN 84. ).
Length = 618
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 277 PAHTRDPPPMAAQDMHRFPMAGSYSRRQSDTVTLH 173
P PPP+A H+ P G RR SD V H
Sbjct: 436 PQAGEPPPPLAGDKPHKCPECGKGFRRSSDLVKHH 470
>BC063620-1|AAH63620.1| 488|Homo sapiens AGRN protein protein.
Length = 488
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 190 HSGGGCKNLPLGIDACLEPPSGADPECVREGS 285
H G C+NL G C PP P C E S
Sbjct: 2 HGGAPCQNLEAGRFHCQCPPGRVGPTCADEKS 33
>BC007649-1|AAH07649.1| 488|Homo sapiens AGRN protein protein.
Length = 488
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 190 HSGGGCKNLPLGIDACLEPPSGADPECVREGS 285
H G C+NL G C PP P C E S
Sbjct: 2 HGGAPCQNLEAGRFHCQCPPGRVGPTCADEKS 33
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 190 HSGGGCKNLPLGIDACLEPPSGADPECVREGS 285
H G C+NL G C PP P C E S
Sbjct: 1559 HGGAPCQNLEAGRFHCQCPPGRVGPTCADEKS 1590
>AK055799-1|BAB71019.1| 517|Homo sapiens protein ( Homo sapiens
cDNA FLJ31237 fis, clone KIDNE2004846, highly similar to
26S PROTEASOME REGULATORY SUBUNIT S3. ).
Length = 517
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 259 PPPMAAQDMH-RFPMAGSYSRRQSDTVTLHALSHY 158
PPP A QD+ + A +S+R+ DTVTL + +
Sbjct: 27 PPPPAPQDVEMKEEAAAEHSQRELDTVTLEDIKEH 61
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 190 HSGGGCKNLPLGIDACLEPPSGADPECVREGS 285
H G C+NL G C PP P C E S
Sbjct: 1540 HGGAPCQNLEAGRFHCQCPPGRVGPTCADEKS 1571
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 190 HSGGGCKNLPLGIDACLEPPSGADPECVREGS 285
H G C+NL G C PP P C E S
Sbjct: 1559 HGGAPCQNLEAGRFHCQCPPGRVGPTCADEKS 1590
>U79458-1|AAD10951.1| 268|Homo sapiens WW domain binding protein-2
protein.
Length = 268
Score = 28.7 bits (61), Expect = 9.6
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -3
Query: 290 MTLPSRTHSGSAPDGGSRHASIPNGRFLQPPPE*YSDTPC 171
+ + S+ G P G ++ +P+G ++ PPP PC
Sbjct: 134 LQVASQASRGEVPSGAYGYSYMPSGAYVYPPPVANGMYPC 173
>BC010616-1|AAH10616.1| 261|Homo sapiens WW domain binding protein
2 protein.
Length = 261
Score = 28.7 bits (61), Expect = 9.6
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -3
Query: 290 MTLPSRTHSGSAPDGGSRHASIPNGRFLQPPPE*YSDTPC 171
+ + S+ G P G ++ +P+G ++ PPP PC
Sbjct: 127 LQVASQASRGEVPSGAYGYSYMPSGAYVYPPPVANGMYPC 166
>BC007452-1|AAH07452.1| 261|Homo sapiens WW domain binding protein
2 protein.
Length = 261
Score = 28.7 bits (61), Expect = 9.6
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -3
Query: 290 MTLPSRTHSGSAPDGGSRHASIPNGRFLQPPPE*YSDTPC 171
+ + S+ G P G ++ +P+G ++ PPP PC
Sbjct: 127 LQVASQASRGEVPSGAYGYSYMPSGAYVYPPPVANGMYPC 166
>AF087866-1|AAP97175.1| 261|Homo sapiens WW-domain binding protein
2 protein.
Length = 261
Score = 28.7 bits (61), Expect = 9.6
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -3
Query: 290 MTLPSRTHSGSAPDGGSRHASIPNGRFLQPPPE*YSDTPC 171
+ + S+ G P G ++ +P+G ++ PPP PC
Sbjct: 127 LQVASQASRGEVPSGAYGYSYMPSGAYVYPPPVANGMYPC 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,804,636
Number of Sequences: 237096
Number of extensions: 1431330
Number of successful extensions: 3306
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3306
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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