Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_E17
(445 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 31 0.50
AC024798-10|AAK29912.1| 254|Caenorhabditis elegans Hypothetical... 27 4.6
Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF332202-1|AAK17973.1| 573|Caenorhabditis elegans nuclear recep... 27 8.1
AF099002-3|AAO91691.1| 570|Caenorhabditis elegans Hypothetical ... 27 8.1
AF099002-2|AAC68740.2| 556|Caenorhabditis elegans Hypothetical ... 27 8.1
AF099002-1|AAK68587.1| 559|Caenorhabditis elegans Hypothetical ... 27 8.1
AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative acti... 27 8.1
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform a protein.
Length = 1256
Score = 30.7 bits (66), Expect = 0.50
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -1
Query: 244 AQDMHRFPMAGSYSRRQSDTVTLHALSHYTHHTARTLQHITRRYTSSVRDPSFLF*NHNF 65
A +M AG S RQ+D TL + HY +++ H RR + D SF N+ +
Sbjct: 247 AHNMSSSWYAGDQSSRQTDFGTLPSPQHYNSNSSD--HHPPRRLAKTQSDLSFDSLNNTY 304
Query: 64 *QDSSGH 44
++S H
Sbjct: 305 FNNTSNH 311
>AC024798-10|AAK29912.1| 254|Caenorhabditis elegans Hypothetical
protein Y48G9A.12 protein.
Length = 254
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 164 ALHASHCTHTTAYHAKVHKFCKGPFFFILKP*LLTR 57
A AS T + + K+HKFC P F+L L R
Sbjct: 172 AFFASRQTFSGDFGLKLHKFCNFPRVFLLSESFLER 207
>Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical
protein F09B9.2b protein.
Length = 639
Score = 26.6 bits (56), Expect = 8.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 133 VVCVQCDACNAKVHGVSLYHSG 198
V C +C C+A +HG + H G
Sbjct: 153 VYCFKCSECSAVLHGEYMSHHG 174
>Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical
protein F09B9.2a protein.
Length = 625
Score = 26.6 bits (56), Expect = 8.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 133 VVCVQCDACNAKVHGVSLYHSG 198
V C +C C+A +HG + H G
Sbjct: 139 VYCFKCSECSAVLHGEYMSHHG 160
>AF332202-1|AAK17973.1| 573|Caenorhabditis elegans nuclear receptor
NHR-23 protein.
Length = 573
Score = 26.6 bits (56), Expect = 8.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 283 YPPAHTRDPPPMAAQDMHRFPMAGSYSRRQSDTVTLHALS 164
YPP + P + Q H FPM + T TLHA S
Sbjct: 2 YPPV--TNSWPRSRQQAHNFPMQAVEQKLADATRTLHAKS 39
>AF099002-3|AAO91691.1| 570|Caenorhabditis elegans Hypothetical
protein Y71H10B.1c protein.
Length = 570
Score = 26.6 bits (56), Expect = 8.1
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -2
Query: 228 DSQWQVLTAAARVIQ*HSMHFRITRITLHAHYSISREGTQVL*GTLLFYFKTITFNKTLL 49
DS+ VL + + H + I H HYS+ + T V G ++ +K+I F
Sbjct: 138 DSRVYVLNTLFNMPETHLICQLIDFFDKHPHYSMLTDKTGVKGGEVMMSYKSI-FQDLRR 196
Query: 48 VTSFIQIEKEM 16
V ++ +E M
Sbjct: 197 VIDWVHVESTM 207
>AF099002-2|AAC68740.2| 556|Caenorhabditis elegans Hypothetical
protein Y71H10B.1a protein.
Length = 556
Score = 26.6 bits (56), Expect = 8.1
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -2
Query: 228 DSQWQVLTAAARVIQ*HSMHFRITRITLHAHYSISREGTQVL*GTLLFYFKTITFNKTLL 49
DS+ VL + + H + I H HYS+ + T V G ++ +K+I F
Sbjct: 124 DSRVYVLNTLFNMPETHLICQLIDFFDKHPHYSMLTDKTGVKGGEVMMSYKSI-FQDLRR 182
Query: 48 VTSFIQIEKEM 16
V ++ +E M
Sbjct: 183 VIDWVHVESTM 193
>AF099002-1|AAK68587.1| 559|Caenorhabditis elegans Hypothetical
protein Y71H10B.1b protein.
Length = 559
Score = 26.6 bits (56), Expect = 8.1
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -2
Query: 228 DSQWQVLTAAARVIQ*HSMHFRITRITLHAHYSISREGTQVL*GTLLFYFKTITFNKTLL 49
DS+ VL + + H + I H HYS+ + T V G ++ +K+I F
Sbjct: 127 DSRVYVLNTLFNMPETHLICQLIDFFDKHPHYSMLTDKTGVKGGEVMMSYKSI-FQDLRR 185
Query: 48 VTSFIQIEKEM 16
V ++ +E M
Sbjct: 186 VIDWVHVESTM 196
>AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative
actin-binding proteinUNC-115 protein.
Length = 639
Score = 26.6 bits (56), Expect = 8.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 133 VVCVQCDACNAKVHGVSLYHSG 198
V C +C C+A +HG + H G
Sbjct: 153 VYCFKCSECSAVLHGEYMSHHG 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,912,719
Number of Sequences: 27780
Number of extensions: 220314
Number of successful extensions: 622
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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