Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_E13
         (457 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   1.6  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   2.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   4.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   4.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   4.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   6.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.4  

>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 453 KTMVQNNGLHIYGNKNKY*NIS 388
           KT+  NN  + Y NK  Y NI+
Sbjct: 310 KTIHNNNNYNNYNNKKLYYNIN 331


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic
          acetylcholine receptor beta2subunit protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 29 MFPGEFVIMCLCVTGLSVCLIC 94
          +FP  FVI+ + + G  +C +C
Sbjct: 7  IFPVLFVIINVLLHGQVICFVC 28


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 79  CVPYLYKREC 108
           CVP +Y +EC
Sbjct: 37  CVPEIYSKEC 46


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 79  CVPYLYKREC 108
           CVP +Y +EC
Sbjct: 37  CVPEIYSKEC 46


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 79  CVPYLYKREC 108
           CVP +Y +EC
Sbjct: 37  CVPEIYSKEC 46


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 73  PSYTQAHNYKFAWKHSTSCRIRHE 2
           P+Y Q  N+   WK   S +I  E
Sbjct: 666 PNYDQVTNWYMGWKGMLSEKILAE 689


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 11/46 (23%), Positives = 16/46 (34%)
 Frame = -1

Query: 154 KSYLSNCEIKKYFT*CTLSYTNKAHTQPSYTQAHNYKFAWKHSTSC 17
           K+Y   C  +K  T    ++ N+         A  Y F   H   C
Sbjct: 448 KNYTKFCSTEKRLTKQNTAFENQLQFVSDAVMAFAYAFRDMHKELC 493


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,137
Number of Sequences: 438
Number of extensions: 2978
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)