Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_E10
         (665 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot...    35   0.30 
AF007194-1|AAC02272.1|  957|Homo sapiens mucin protein.                35   0.30 

>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
           protein.
          Length = 1217

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -1

Query: 332 TYTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELSVRAPCASLR 153
           T T S +TP++++ +    V +      + F +  ++  +TP P  PS LS   P  SLR
Sbjct: 327 TETTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPTPVTPSSLSTDIPTTSLR 384

Query: 152 TL 147
           TL
Sbjct: 385 TL 386


>AF007194-1|AAC02272.1|  957|Homo sapiens mucin protein.
          Length = 957

 Score = 34.7 bits (76), Expect = 0.30
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -1

Query: 332 TYTLSSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELSVRAPCASLR 153
           T T S +TP++++ +    V +      + F +  ++  +TP P  PS LS   P  SLR
Sbjct: 327 TETTSESTPSLSSSTIYSTVSTSTTAITSHFTT--SETAVTPTPVTPSSLSTDIPTTSLR 384

Query: 152 TL 147
           TL
Sbjct: 385 TL 386


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,809,831
Number of Sequences: 237096
Number of extensions: 1581704
Number of successful extensions: 2782
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2782
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)