Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_E10
         (665 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...    29   3.0  
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z75550-2|CAA99928.2|  421|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 208 GVKVPFAGNDKNIVSAIGSLDLTNRQ 285
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 208 GVKVPFAGNDKNIVSAIGSLDLTNRQ 285
           GV VPF G DK+I++     D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262


>Z75550-2|CAA99928.2|  421|Caenorhabditis elegans Hypothetical
           protein T22C1.3 protein.
          Length = 421

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 296 LQPLEWH-WIMCKFFNASLFFSFTLI 370
           L P+ WH WI+    NA+ FF  T++
Sbjct: 356 LMPVMWHMWIVSSSGNANFFFGTTIV 381


>Z68752-7|CAA92982.2|  693|Caenorhabditis elegans Hypothetical
           protein T12G3.1 protein.
          Length = 693

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = -1

Query: 320 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 147
           +SATPAV AP+  + V    PI  T+ +       L P    P E++  V AP +   + 
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588

Query: 146 ELVNSSGSS 120
           E ++S   S
Sbjct: 589 ENISSDFES 597


>U13644-7|AAM48536.2|  700|Caenorhabditis elegans Hypothetical
           protein F56D2.6b protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 104 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 244
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


>U13644-6|AAB52678.1|  739|Caenorhabditis elegans Hypothetical
           protein F56D2.6a protein.
          Length = 739

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 104 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 244
           T+   +  LNY QA+   G  TEL       PL  +L   L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,734,819
Number of Sequences: 27780
Number of extensions: 262586
Number of successful extensions: 604
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)