Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_E06
(676 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041379-1|AAH41379.1| 240|Homo sapiens transmembrane protein 6... 36 0.099
Y14391-1|CAA74749.2| 403|Homo sapiens GTP-binding protein protein. 31 2.8
BX000483-1|CAI41972.1| 286|Homo sapiens GTP binding protein 6 (... 31 2.8
BT007360-1|AAP36024.1| 403|Homo sapiens Pseudoautosomal GTP-bin... 31 2.8
BC014636-1|AAH14636.1| 403|Homo sapiens pseudoautosomal GTP-bin... 31 2.8
AK223412-1|BAD97132.1| 403|Homo sapiens pseudoautosomal GTP-bin... 31 2.8
X03663-1|CAA27300.1| 972|Homo sapiens protein ( Human mRNA for ... 31 3.7
U63963-1|AAB51696.1| 972|Homo sapiens CSF-1 receptor protein. 31 3.7
U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine... 31 3.7
J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein. 31 3.7
BC129939-1|AAI29940.1| 454|Homo sapiens CSF1R protein protein. 31 3.7
BC047521-1|AAH47521.1| 972|Homo sapiens colony stimulating fact... 31 3.7
AB209425-1|BAD92662.1| 1231|Homo sapiens ryanodine receptor 1 (s... 31 3.7
AB208819-1|BAD92056.1| 725|Homo sapiens colony stimulating fact... 31 3.7
AY129022-1|AAM98765.1| 303|Homo sapiens unknown protein. 31 4.9
BC014642-1|AAH14642.1| 780|Homo sapiens hypothetical protein MG... 30 8.6
AK093037-1|BAC04027.1| 555|Homo sapiens protein ( Homo sapiens ... 30 8.6
>BC041379-1|AAH41379.1| 240|Homo sapiens transmembrane protein 65
protein.
Length = 240
Score = 36.3 bits (80), Expect = 0.099
Identities = 19/41 (46%), Positives = 20/41 (48%)
Frame = -2
Query: 381 PRGAPPPRPIGWYCCAYGSLS*APATGAPPRMGERRLYISP 259
P A PRP W CC G L+ AP G P G RRL P
Sbjct: 20 PAAAAAPRPPSWCCCGRGLLALAPPGGLPG--GPRRLGTHP 58
>Y14391-1|CAA74749.2| 403|Homo sapiens GTP-binding protein protein.
Length = 403
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 519 KRHFVRNTRTLRAVPVRAVHAYARCGR 599
KRH +R RT R PV +V Y CG+
Sbjct: 168 KRHLLRRQRTRREFPVISVVGYTNCGK 194
>BX000483-1|CAI41972.1| 286|Homo sapiens GTP binding protein 6
(putative) protein.
Length = 286
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 519 KRHFVRNTRTLRAVPVRAVHAYARCGR 599
KRH +R RT R PV +V Y CG+
Sbjct: 51 KRHLLRRQRTRREFPVISVVGYTNCGK 77
>BT007360-1|AAP36024.1| 403|Homo sapiens Pseudoautosomal
GTP-binding protein-like protein.
Length = 403
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 519 KRHFVRNTRTLRAVPVRAVHAYARCGR 599
KRH +R RT R PV +V Y CG+
Sbjct: 168 KRHLLRRQRTRREFPVISVVGYTNCGK 194
>BC014636-1|AAH14636.1| 403|Homo sapiens pseudoautosomal
GTP-binding protein-like protein protein.
Length = 403
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 519 KRHFVRNTRTLRAVPVRAVHAYARCGR 599
KRH +R RT R PV +V Y CG+
Sbjct: 168 KRHLLRRQRTRREFPVISVVGYTNCGK 194
>AK223412-1|BAD97132.1| 403|Homo sapiens pseudoautosomal
GTP-binding protein-like protein variant protein.
Length = 403
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 519 KRHFVRNTRTLRAVPVRAVHAYARCGR 599
KRH +R RT R PV +V Y CG+
Sbjct: 168 KRHLLRRQRTRREFPVISVVGYTNCGK 194
>X03663-1|CAA27300.1| 972|Homo sapiens protein ( Human mRNA for
c-fms proto-oncogene. ).
Length = 972
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 90 VHAAMAVWMR-WQCMRMIGEHQCMMIVIRW-IGALRPGRPPCPQLPMTELLRDRRLWATV 263
+H A + + +QC ++G + M I IR + + PG PP L EL+R R A +
Sbjct: 164 IHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPG-PPALTLVPAELVRIRGEAAQI 222
Query: 264 ICTADA 281
+C+A +
Sbjct: 223 VCSASS 228
>U63963-1|AAB51696.1| 972|Homo sapiens CSF-1 receptor protein.
Length = 972
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 90 VHAAMAVWMR-WQCMRMIGEHQCMMIVIRW-IGALRPGRPPCPQLPMTELLRDRRLWATV 263
+H A + + +QC ++G + M I IR + + PG PP L EL+R R A +
Sbjct: 164 IHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPG-PPALTLVPAELVRIRGEAAQI 222
Query: 264 ICTADA 281
+C+A +
Sbjct: 223 VCSASS 228
>U48508-1|AAC51191.1| 5038|Homo sapiens skeletal muscle ryanodine
receptor protein.
Length = 5038
Score = 31.1 bits (67), Expect = 3.7
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -2
Query: 468 HVVF*TR*MLTSP*LR*YLRGTIPPASSLPRGAPPP 361
HV+ T ML S R + RG P S+LP GAPPP
Sbjct: 3268 HVIEITLPMLCSYLPRWWERGPEAPPSALPAGAPPP 3303
>J05200-1|AAA60294.1| 5032|Homo sapiens RYR1 protein.
Length = 5032
Score = 31.1 bits (67), Expect = 3.7
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -2
Query: 468 HVVF*TR*MLTSP*LR*YLRGTIPPASSLPRGAPPP 361
HV+ T ML S R + RG P S+LP GAPPP
Sbjct: 3267 HVIEITLPMLCSYLPRWWERGPEAPPSALPAGAPPP 3302
>BC129939-1|AAI29940.1| 454|Homo sapiens CSF1R protein protein.
Length = 454
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 90 VHAAMAVWMR-WQCMRMIGEHQCMMIVIRW-IGALRPGRPPCPQLPMTELLRDRRLWATV 263
+H A + + +QC ++G + M I IR + + PG PP L EL+R R A +
Sbjct: 164 IHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPG-PPALTLVPAELVRIRGEAAQI 222
Query: 264 ICTADA 281
+C+A +
Sbjct: 223 VCSASS 228
>BC047521-1|AAH47521.1| 972|Homo sapiens colony stimulating factor
1 receptor, formerly McDonough feline sarcoma viral (
protein.
Length = 972
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 90 VHAAMAVWMR-WQCMRMIGEHQCMMIVIRW-IGALRPGRPPCPQLPMTELLRDRRLWATV 263
+H A + + +QC ++G + M I IR + + PG PP L EL+R R A +
Sbjct: 164 IHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPG-PPALTLVPAELVRIRGEAAQI 222
Query: 264 ICTADA 281
+C+A +
Sbjct: 223 VCSASS 228
>AB209425-1|BAD92662.1| 1231|Homo sapiens ryanodine receptor 1
(skeletal) variant protein.
Length = 1231
Score = 31.1 bits (67), Expect = 3.7
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -2
Query: 468 HVVF*TR*MLTSP*LR*YLRGTIPPASSLPRGAPPP 361
HV+ T ML S R + RG P S+LP GAPPP
Sbjct: 213 HVIEITLPMLCSYLPRWWERGPEAPPSALPAGAPPP 248
>AB208819-1|BAD92056.1| 725|Homo sapiens colony stimulating factor
1 receptor precursor variant protein.
Length = 725
Score = 31.1 bits (67), Expect = 3.7
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 90 VHAAMAVWMR-WQCMRMIGEHQCMMIVIRW-IGALRPGRPPCPQLPMTELLRDRRLWATV 263
+H A + + +QC ++G + M I IR + + PG PP L EL+R R A +
Sbjct: 218 IHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPG-PPALTLVPAELVRIRGEAAQI 276
Query: 264 ICTADA 281
+C+A +
Sbjct: 277 VCSASS 282
>AY129022-1|AAM98765.1| 303|Homo sapiens unknown protein.
Length = 303
Score = 30.7 bits (66), Expect = 4.9
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 386 LYRAALRPRVP*AGTVARTDLCRKLPLQVLRRAWVSV 276
L+R+ L PR P AG VAR +P RAW V
Sbjct: 130 LFRSVLGPREPKAGVVARATGAIPIPGAPAARAWAGV 166
>BC014642-1|AAH14642.1| 780|Homo sapiens hypothetical protein
MGC15523 protein.
Length = 780
Score = 29.9 bits (64), Expect = 8.6
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -2
Query: 399 PPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPPRMGERRLYISPLPIGACRGGAL 226
PPAS G+P P+P G GS + P + PP R LPI + G L
Sbjct: 696 PPASGPGSGSPLPQPWGDAQVILGSPARPPFSFQPPAEQTPRRAFCSLPISSLLSGNL 753
>AK093037-1|BAC04027.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ35718 fis, clone TESTI2000616. ).
Length = 555
Score = 29.9 bits (64), Expect = 8.6
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -2
Query: 399 PPASSLPRGAPPPRPIGWYCCAYGSLS*APATGAPPRMGERRLYISPLPIGACRGGAL 226
PPAS G+P P+P G GS + P + PP R LPI + G L
Sbjct: 471 PPASGPGSGSPLPQPWGDAQVILGSPARPPFSFQPPAEQTPRRAFCSLPISSLLSGNL 528
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,736,140
Number of Sequences: 237096
Number of extensions: 2545829
Number of successful extensions: 7957
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7945
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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