BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_E06
(676 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024207-1|ABC86269.1| 706|Drosophila melanogaster RE41071p pro... 29 5.8
AY070999-1|AAL48621.1| 502|Drosophila melanogaster RE08823p pro... 29 5.8
AE014297-771|AAF54257.2| 502|Drosophila melanogaster CG9716-PA ... 29 5.8
AE014296-1473|AAF50401.3| 706|Drosophila melanogaster CG6817-PA... 29 5.8
>BT024207-1|ABC86269.1| 706|Drosophila melanogaster RE41071p
protein.
Length = 706
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -3
Query: 173 SYHDHHTLVLADHPHTLPSHPYRHSRVNDCQPQICGSHTFHLHTWVLVLDKGL 15
S +DH T++L +H + H +RH V+ P+ T W++++ GL
Sbjct: 507 SRNDHVTVILREHESSHHGHSHRHGHVHS-PPE-----TLSAVAWMIIMGDGL 553
>AY070999-1|AAL48621.1| 502|Drosophila melanogaster RE08823p
protein.
Length = 502
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 249 LWATVICTADAHPCAAEHL*RELTTEI 329
L+ T++C A HPC E L +EL TE+
Sbjct: 316 LYFTILCLA-MHPCYQEKLHKELVTEL 341
>AE014297-771|AAF54257.2| 502|Drosophila melanogaster CG9716-PA
protein.
Length = 502
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 249 LWATVICTADAHPCAAEHL*RELTTEI 329
L+ T++C A HPC E L +EL TE+
Sbjct: 316 LYFTILCLA-MHPCYQEKLHKELVTEL 341
>AE014296-1473|AAF50401.3| 706|Drosophila melanogaster CG6817-PA
protein.
Length = 706
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -3
Query: 173 SYHDHHTLVLADHPHTLPSHPYRHSRVNDCQPQICGSHTFHLHTWVLVLDKGL 15
S +DH T++L +H + H +RH V+ P+ T W++++ GL
Sbjct: 507 SRNDHVTVILREHESSHHGHSHRHGHVHS-PPE-----TLSAVAWMIIMGDGL 553
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,321,306
Number of Sequences: 53049
Number of extensions: 785214
Number of successful extensions: 3052
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3028
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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