Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_E04
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    42   4e-06
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    36   3e-04
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    30   0.019
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    27   0.13 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   3.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   3.7  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   4.9  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 42.3 bits (95), Expect = 4e-06
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = +3

Query: 6   LHMDKGIWGDPENFRPERFIVDGQLCVAKDQSLPFGAGKRLCAGETFA 149
           +H D  I+ +P++F PERF  D          LPFG G R C G  FA
Sbjct: 403 IHRDSAIYPNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFA 450


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 36.3 bits (80), Expect = 3e-04
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
 Frame = +3

Query: 6   LHMDKGIWGDPENFRPERFIVDGQLCVAKDQSLPFGAGKRLCAGETFARQIMFQVFAGFM 185
           LH    I+ +P+ F P+ F+ +          +PF AG R C G  +A   +  V +  +
Sbjct: 447 LHRQPHIYPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTIL 506

Query: 186 QAFHVSTADGRPLKEPAKRIQG--IITTIPEFWIRVIPR 296
           + F V +     +KE   R+Q   I+     F IR+ PR
Sbjct: 507 RNFRVRS----DVKESEFRLQADIILKRADGFKIRLEPR 541


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 0.019
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 105 PFGAGKRLCAGETFARQIMFQVFAGFMQAFHV 200
           PFGAG+R+C G+ F    +  + A  ++ F +
Sbjct: 458 PFGAGRRICPGKRFVDLALQLILAKIIREFEI 489


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 345 YLFYTFYILICMIMFMIWVS 286
           YLF+T YI  C+I+ M WVS
Sbjct: 247 YLFHT-YIPTCLIVIMSWVS 265


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 345 YLFYTFYILICMIMFMIWVS 286
           Y     YI  CM++ + WVS
Sbjct: 243 YYLIQIYIPCCMLVIVSWVS 262


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 345 YLFYTFYILICMIMFMIWVS 286
           Y     YI  CM++ + WVS
Sbjct: 243 YYLIQIYIPCCMLVIVSWVS 262


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 164 EHYLTSKCFPSAKSFPSSK 108
           ++YLT   FPS  + PS K
Sbjct: 378 QNYLTVHSFPSTLNIPSVK 396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,603
Number of Sequences: 438
Number of extensions: 4402
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)