Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_D22
         (570 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z12017-9|CAA78053.1|  537|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z11505-11|CAA77591.1|  537|Caenorhabditis elegans Hypothetical p...    29   3.1  
U55370-7|AAA97998.2|  388|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z36753-3|CAA85332.1|  297|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U23511-14|AAC46799.1|  357|Caenorhabditis elegans Hypothetical p...    27   9.5  

>Z12017-9|CAA78053.1|  537|Caenorhabditis elegans Hypothetical
           protein R08D7.7 protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 7/26 (26%), Positives = 20/26 (76%)
 Frame = +1

Query: 40  FIGVDVGSGSVRAALVDSNGHILNSS 117
           F+G+D+ +  ++A ++D NG +++++
Sbjct: 5   FLGIDLSTQQIKAVIIDQNGKVVHTT 30


>Z11505-11|CAA77591.1|  537|Caenorhabditis elegans Hypothetical
           protein R08D7.7 protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 7/26 (26%), Positives = 20/26 (76%)
 Frame = +1

Query: 40  FIGVDVGSGSVRAALVDSNGHILNSS 117
           F+G+D+ +  ++A ++D NG +++++
Sbjct: 5   FLGIDLSTQQIKAVIIDQNGKVVHTT 30


>U55370-7|AAA97998.2|  388|Caenorhabditis elegans Hypothetical
           protein K03B4.1 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/61 (19%), Positives = 30/61 (49%)
 Frame = +1

Query: 265 CSLVALDKNGNPMAVNNSEDNERNIIMWMDHRAQVEADLINKTNHKILKYVGGKVSLEME 444
           C+  +  +  N + + N+    ++  +WM   A+    +IN  N ++  Y+   + LE++
Sbjct: 231 CTGASYTEKKNQVDLGNARQRMKHCALWMSKSAEELEGIINDANVRVGAYLDEGLDLEVK 290

Query: 445 M 447
           +
Sbjct: 291 V 291


>Z36753-3|CAA85332.1|  297|Caenorhabditis elegans Hypothetical
           protein T09A5.4 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +1

Query: 127 IQVWKLKAG--FYEQSSDDIWNCCLTVMKEVIKDIDPTTIKGIGFDATCSLVALDK 288
           + +WK  +   F +  S DI       +   I+ +DPT +  I  D   +L+++DK
Sbjct: 90  VSIWKRDSDLPFEQYISGDIARLFNKALDVAIRHMDPTVVHTIARDGGVALMSIDK 145


>U23511-14|AAC46799.1|  357|Caenorhabditis elegans Hypothetical
           protein C32D5.12 protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +1

Query: 295 NPMAVNNSEDNERNIIMWMDHRAQVEA--DLINKTNHKILKYVG 420
           +P  +  S+D E+N +MW D+    E+  D +   N K L  +G
Sbjct: 75  SPFPIFYSKDKEQNNLMWRDNLNACESVVDTMTNLNIKTLVNIG 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,453,694
Number of Sequences: 27780
Number of extensions: 277804
Number of successful extensions: 804
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)