BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_D20
(366 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY084207-1|AAL89945.1| 1282|Drosophila melanogaster SD03956p pro... 28 3.3
AY069771-1|AAL39916.1| 2119|Drosophila melanogaster SD01389p pro... 28 3.3
AE014297-4250|AAF56803.1| 2119|Drosophila melanogaster CG10011-P... 28 3.3
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy... 28 4.3
AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,... 27 10.0
>AY084207-1|AAL89945.1| 1282|Drosophila melanogaster SD03956p
protein.
Length = 1282
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 160 GLHEGCIELLEAGVEID 110
G HE C++LLE+G +ID
Sbjct: 725 GFHEVCLQLLESGAKID 741
>AY069771-1|AAL39916.1| 2119|Drosophila melanogaster SD01389p protein.
Length = 2119
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 160 GLHEGCIELLEAGVEID 110
G HE C++LLE+G +ID
Sbjct: 1562 GFHEVCLQLLESGAKID 1578
>AE014297-4250|AAF56803.1| 2119|Drosophila melanogaster CG10011-PA
protein.
Length = 2119
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 160 GLHEGCIELLEAGVEID 110
G HE C++LLE+G +ID
Sbjct: 1562 GFHEVCLQLLESGAKID 1578
>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
chain protein.
Length = 4559
Score = 27.9 bits (59), Expect = 4.3
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = -3
Query: 346 ELKLYLLGGHYFIHLH*RNIHLVISFNAKIIQYISKFRYIELVGKY*LEIFRE*ESEVRF 167
EL L + F+H +I + NAK Y + ++EL+ Y + + ++ +
Sbjct: 3078 ELALPVSNFMAFVHKTVNDISKLYLANAKRYNYTTPKSFLELIALYSKLLHEKVKANLDR 3137
Query: 166 PGGLHEGCIELLEAGVEID--RGVRTLEEVQLSVQ 68
L G I+L E+D + V ++EV+L ++
Sbjct: 3138 RLRLENGLIKLASCTKEVDALQDVLKVQEVELKIK 3172
>AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,
isoform B protein.
Length = 1397
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 65 SLDGKLNLFKSPDTSVDFNAGFKKFDT 145
SL G F S TSVDF + F DT
Sbjct: 301 SLGGHSERFASSSTSVDFRSRFSSVDT 327
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,873,891
Number of Sequences: 53049
Number of extensions: 193824
Number of successful extensions: 708
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -