Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_D19
(393 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 203 1e-52
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 203 1e-52
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 203 1e-52
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 203 1e-52
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 203 1e-52
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 203 1e-52
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 203 1e-52
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 203 1e-52
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 203 1e-52
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 203 1e-52
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 203 1e-52
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 203 1e-52
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 202 4e-52
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 201 6e-52
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 175 6e-44
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 136 2e-32
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 123 2e-28
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 91 1e-18
X83929-1|CAA58781.1| 896|Homo sapiens desmocollin type 3 protein. 28 9.5
D17427-1|BAA04249.1| 896|Homo sapiens desmocollin type 4 protein. 28 9.5
AF297090-1|AAG17896.1| 316|Homo sapiens desmocollin 3 protein. 28 9.5
AF293359-2|AAG23427.1| 839|Homo sapiens desmocollin 3b protein. 28 9.5
AF293359-1|AAG23426.1| 896|Homo sapiens desmocollin 3a protein. 28 9.5
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 17 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 76
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 77 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 132
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 4 ISKKRKFVADGIFK 17
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 17 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 76
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 77 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 132
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 4 ISKKRKFVADGIFK 17
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 203 bits (496), Expect = 1e-52
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 202 bits (492), Expect = 4e-52
Identities = 100/116 (86%), Positives = 109/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAE+VATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 201 bits (491), Expect = 6e-52
Identities = 100/116 (86%), Positives = 108/116 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
PE SVELYAEKVATRGLCAIAQAE LRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKG 133
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 175 bits (425), Expect = 6e-44
Identities = 88/100 (88%), Positives = 94/100 (94%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRR 345
PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRR
Sbjct: 78 GFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 136 bits (329), Expect = 2e-32
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +1
Query: 46 RAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRIIRELTSVVQKRF 225
+AELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR IRELT+VVQKRF
Sbjct: 18 KAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRF 77
Query: 226 IIPEQSVELYAEKVATRG 279
PE SVELYAEKVATRG
Sbjct: 78 GFPEGSVELYAEKVATRG 95
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 6 ISKKRKFVGDGVYK 47
ISKKRKFV DG++K
Sbjct: 5 ISKKRKFVADGIFK 18
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 123 bits (297), Expect = 2e-28
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +1
Query: 178 KGRIIRELTSVVQKRFIIPEQSVELYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYG 357
+GR IRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 358 VLRVIMDSGARG 393
VLR IM+SGA+G
Sbjct: 66 VLRFIMESGAKG 77
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 91.1 bits (216), Expect = 1e-18
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +1
Query: 250 LYAEKVATRGLCAIAQAESLRYILIGGLAVRRACYGVLRVIMDSGARG 393
LYAEKVATRGLCAIAQAESLRY L+GGLAVRRACYGVLR IM+SGA+G
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKG 48
>X83929-1|CAA58781.1| 896|Homo sapiens desmocollin type 3 protein.
Length = 896
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 27 VGDGVYKGGAQ*VPHEGAGRGWLLRCGGACHTHTFRNHYYGHKDAE 164
+G G+ GG + + G L C GA H HT + GH + +
Sbjct: 767 MGSGMKNGGQETIEMMKGGNQTLESCRGAGHHHTLDSCRGGHTEVD 812
>D17427-1|BAA04249.1| 896|Homo sapiens desmocollin type 4 protein.
Length = 896
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 27 VGDGVYKGGAQ*VPHEGAGRGWLLRCGGACHTHTFRNHYYGHKDAE 164
+G G+ GG + + G L C GA H HT + GH + +
Sbjct: 767 MGSGMKNGGQETIEMMKGGNQTLESCRGAGHHHTLDSCRGGHTEVD 812
>AF297090-1|AAG17896.1| 316|Homo sapiens desmocollin 3 protein.
Length = 316
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 27 VGDGVYKGGAQ*VPHEGAGRGWLLRCGGACHTHTFRNHYYGHKDAE 164
+G G+ GG + + G L C GA H HT + GH + +
Sbjct: 187 MGSGMKNGGQETIEMMKGGNQTLESCRGAGHHHTLDSCRGGHTEVD 232
>AF293359-2|AAG23427.1| 839|Homo sapiens desmocollin 3b protein.
Length = 839
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 27 VGDGVYKGGAQ*VPHEGAGRGWLLRCGGACHTHTFRNHYYGHKDAE 164
+G G+ GG + + G L C GA H HT + GH + +
Sbjct: 767 MGSGMKNGGQETIEMMKGGNQTLESCRGAGHHHTLDSCRGGHTEVD 812
>AF293359-1|AAG23426.1| 896|Homo sapiens desmocollin 3a protein.
Length = 896
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 27 VGDGVYKGGAQ*VPHEGAGRGWLLRCGGACHTHTFRNHYYGHKDAE 164
+G G+ GG + + G L C GA H HT + GH + +
Sbjct: 767 MGSGMKNGGQETIEMMKGGNQTLESCRGAGHHHTLDSCRGGHTEVD 812
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,071,920
Number of Sequences: 237096
Number of extensions: 1014217
Number of successful extensions: 2039
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2039
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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