Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_D11
(492 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21322-7|AAA62545.1| 84|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z82261-7|CAH60757.2| 300|Caenorhabditis elegans Hypothetical pr... 28 3.2
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 28 3.2
AF038608-2|AAU05595.1| 297|Caenorhabditis elegans Serpentine re... 27 5.6
Z82276-8|CAL69741.1| 281|Caenorhabditis elegans Hypothetical pr... 27 7.4
U50313-5|AAA92329.1| 270|Caenorhabditis elegans Palmitoyl prote... 27 7.4
AY691522-1|AAU01161.1| 254|Caenorhabditis elegans palmitoyl pro... 27 7.4
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 27 9.8
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 27 9.8
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 27 9.8
>U21322-7|AAA62545.1| 84|Caenorhabditis elegans Hypothetical
protein K10D2.7 protein.
Length = 84
Score = 60.1 bits (139), Expect = 9e-10
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 183 VTVKLLFFARSKELAGTRESTIQLPKKISYHQLLNIISENY-NLGTIKNNILLAKNEEVC 359
+++K+LFF + +L G RE I P++ Y ++ I ENY L I+ ++LA ++E
Sbjct: 2 ISIKVLFFGEACQLVGKREEAIDFPEETDYEEIRKTILENYPALQKIEKVMMLAVDQEYA 61
Query: 360 EENFDIEIKEKDSIAVIPPLSGG 428
E+ IAVIPPLSGG
Sbjct: 62 NPGDRFELVRFTEIAVIPPLSGG 84
>Z82261-7|CAH60757.2| 300|Caenorhabditis elegans Hypothetical
protein C35D6.10 protein.
Length = 300
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 6 VVNKIIFIPRLFIVFVVFIKTYYRQLLVTKQEYLDDYLTP 125
V+ K+I+IP + ++F++F+ + L+ +D TP
Sbjct: 229 VMFKVIYIPLITVIFLIFLSEFPLYALIAITGGVDSLTTP 268
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +3
Query: 210 RSKELAGTRESTIQLPKKISYHQLLNIISENYNLGTIKNNILLAKNEEVCEENFDIEIKE 389
RS+ A ++ S ++ K + I SEN T+ L KNEE+ +EN ++E+K+
Sbjct: 222 RSEAYAKSQISQLEDTVKSLKLHIEKIASENDQ--TVVVETLRLKNEELLKENLNLEMKQ 279
Query: 390 K 392
+
Sbjct: 280 R 280
>AF038608-2|AAU05595.1| 297|Caenorhabditis elegans Serpentine
receptor, class z protein70 protein.
Length = 297
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 6 VVNKIIFIPRLFIVFVVFIKTYYRQLLVTKQEYLDDYLTPI 128
VV K+I+I I+F++F+ + QLLV + TPI
Sbjct: 226 VVFKLIYILLFTIIFILFLPQFSIQLLVYIIAIIGGLTTPI 266
>Z82276-8|CAL69741.1| 281|Caenorhabditis elegans Hypothetical
protein K03D3.14 protein.
Length = 281
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 6 VVNKIIFIPRLFIVFVVFIKTYYRQLLVTKQEYLDDYLTPI 128
VV K+I+I +F +F+ Y QLL+ ++ TPI
Sbjct: 210 VVFKVIYISLFTTIFFIFLPQYSIQLLIYIIFIVEGLTTPI 250
>U50313-5|AAA92329.1| 270|Caenorhabditis elegans Palmitoyl protein
thioesteraseprotein 1 protein.
Length = 270
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 279 LLNIISENYNLGTIKNNILLAKNEEVCEENFDIEIKEKDS 398
L +I +EN N T K N+L KN + + N D + KDS
Sbjct: 165 LADINNENNNNPTYKRNLLSLKNLVLVKFNQDHMVVPKDS 204
>AY691522-1|AAU01161.1| 254|Caenorhabditis elegans palmitoyl
protein thioesterase protein.
Length = 254
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 279 LLNIISENYNLGTIKNNILLAKNEEVCEENFDIEIKEKDS 398
L +I +EN N T K N+L KN + + N D + KDS
Sbjct: 165 LADINNENNNNPTYKRNLLSLKNLVLVKFNQDHMVVPKDS 204
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +3
Query: 291 ISENYNLGTIKNNILLAKNEEVCEEN----FDIEIKEKDSI 401
I EN + + NN++ E CEE D E+ + DS+
Sbjct: 300 IGENLSTSNVGNNVVRETVREYCEETGEILEDFEVNQNDSV 340
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +3
Query: 291 ISENYNLGTIKNNILLAKNEEVCEEN----FDIEIKEKDSI 401
I EN + + NN++ E CEE D E+ + DS+
Sbjct: 203 IGENLSTSNVGNNVVRETVREYCEETGEILEDFEVNQNDSV 243
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +3
Query: 291 ISENYNLGTIKNNILLAKNEEVCEEN----FDIEIKEKDSI 401
I EN + + NN++ E CEE D E+ + DS+
Sbjct: 214 IGENLSTSNVGNNVVRETVREYCEETGEILEDFEVNQNDSV 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,354,329
Number of Sequences: 27780
Number of extensions: 181147
Number of successful extensions: 516
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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