Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_D10
         (557 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74473-2|CAA98949.2|  319|Caenorhabditis elegans Hypothetical pr...    31   0.56 
Z83234-2|CAB70170.2|  715|Caenorhabditis elegans Hypothetical pr...    30   0.98 
Z83233-5|CAB05765.2|  340|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U80437-10|AAN84839.1|  656|Caenorhabditis elegans Hypothetical p...    27   6.9  
Z82259-5|CAB05125.2|  353|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z68217-7|CAA92469.2|  301|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>Z74473-2|CAA98949.2|  319|Caenorhabditis elegans Hypothetical
           protein F56H9.1 protein.
          Length = 319

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = +2

Query: 128 FVSSVVDVKSVIESAAALLLFKKYCNNRVLCIVLKVIMFNILSIGL--FVTIIMNVKAYP 301
           FV SV+            ++   YC+   LCI L +  F +L  G+   V  I N K++ 
Sbjct: 235 FVQSVIQDYVCSMDVVNNMVSHFYCSGDRLCITLSLFSFGVLIYGIDGLVMYIFNYKSFG 294

Query: 302 SIFSGESVENE 334
           S  +     NE
Sbjct: 295 SSVASREPTNE 305


>Z83234-2|CAB70170.2|  715|Caenorhabditis elegans Hypothetical
           protein K09E4.4 protein.
          Length = 715

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 125 LFLLDLYIRAHVFIRNKCSYQNHYVVYMIYHGFGDSK 15
           L +LDLY       +   S+Q H+ V+ + H FG S+
Sbjct: 387 LLILDLYAEVVPAWQMTSSFQGHHFVWCLLHNFGGSR 423


>Z83233-5|CAB05765.2|  340|Caenorhabditis elegans Hypothetical
           protein K06B4.5 protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +1

Query: 106 YKSNKNNIRFECR*CQKCYRVSSCP 180
           Y+S+KNN+ ++CR   +C++  + P
Sbjct: 20  YRSSKNNLIYKCRNINQCFQNYNSP 44


>U80437-10|AAN84839.1|  656|Caenorhabditis elegans Hypothetical
           protein C43E11.11 protein.
          Length = 656

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -1

Query: 428 HTVLEFSEARSGLVASHSTANDSRKESHMTELHFPLI 318
           HT LE     +GLV+S++++  SR + H  + H+P I
Sbjct: 613 HTELEVLAFLNGLVSSYNSSVISRGQQHYVD-HYPRI 648


>Z82259-5|CAB05125.2|  353|Caenorhabditis elegans Hypothetical
           protein C28D4.5 protein.
          Length = 353

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 547 VSNIPPLMTVHMEVLHTPHGF 485
           V N PPL++ H ++LH  HGF
Sbjct: 103 VLNFPPLLS-HNDILHQYHGF 122


>Z68217-7|CAA92469.2|  301|Caenorhabditis elegans Hypothetical
           protein F58G6.2 protein.
          Length = 301

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
 Frame = +2

Query: 101 GYINLIKTIFVSSVVDVKSVIESAAALLLFKKYCNNRVLCIVLKVIMFNILS--IGLFVT 274
           GY+     I +SS+V  K   +   A L+        V   +     F +LS    LF+ 
Sbjct: 117 GYVPPFYEIHISSLVLEKIAEQGDTAFLIVT------VRLTIEDTNTFQLLSQICTLFIL 170

Query: 275 IIMNVKAYPSIFSGESVENEVPSYDFPFVSRSQWSARQPNQTLPLKTPVPYVVIH 439
           I+M +     I     ++ ++ +  F   S ++ S  Q N TL L+  +P+V IH
Sbjct: 171 IVMFISIIIVILCYTFIQKQMKTR-FSASSITKKSQEQLNMTLLLQFILPFVTIH 224


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,576,848
Number of Sequences: 27780
Number of extensions: 284953
Number of successful extensions: 790
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)