Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_D09
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.5  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   2.7  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   2.7  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   4.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   6.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.1  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 609 SMKSQRT*RGRANCTIPLCIHA 544
           S +SQR   GRA C  P C  A
Sbjct: 278 SPRSQRRYTGRATCDCPNCQEA 299


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 575 LTVQFPCVYMLTLNIIFF 522
           L VQ+P + + T NI+F+
Sbjct: 34  LAVQYPRIVVSTFNIVFY 51


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 311 KNYTNCGTDFGKSIP 267
           KNY NC  D GK  P
Sbjct: 42  KNYVNCLLDRGKCSP 56


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 311 KNYTNCGTDFGKSIP 267
           KNY NC  D GK  P
Sbjct: 42  KNYVNCLLDRGKCSP 56


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 311 KNYTNCGTDFGKSIP 267
           KNY NC  D G+  P
Sbjct: 39  KNYVNCLLDKGRCTP 53


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 311 KNYTNCGTDFGKSIP 267
           KNY NC  + GK  P
Sbjct: 44  KNYVNCLLEKGKCTP 58


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 391 LLIVFQCVVHLL 426
           LLI+F C++HL+
Sbjct: 272 LLILFSCLLHLV 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,655
Number of Sequences: 336
Number of extensions: 2015
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)