Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_D08
         (497 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5 prot...   283   3e-76
BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5 pr...   283   3e-76
BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5 pr...   283   3e-76
AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5 pr...   283   3e-76
AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5 va...   279   4e-75
AB007149-1|BAA25815.1|   55|Homo sapiens ribosomal protein S5 pr...   113   3e-25
AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5 va...    92   9e-19
BC000241-1|AAH00241.1|  242|Homo sapiens mitochondrial ribosomal...    30   3.9  

>U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  283 bits (693), Expect = 3e-76
 Identities = 137/141 (97%), Positives = 139/141 (98%)
 Frame = -2

Query: 496 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 317
           AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPRE
Sbjct: 64  AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPRE 123

Query: 316 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKG 137
           DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKG
Sbjct: 124 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKG 183

Query: 136 SSNSYAIKKKDELERVAKSNR 74
           SSNSYAIKKKDELERVAKSNR
Sbjct: 184 SSNSYAIKKKDELERVAKSNR 204


>BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  283 bits (693), Expect = 3e-76
 Identities = 137/141 (97%), Positives = 139/141 (98%)
 Frame = -2

Query: 496 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 317
           AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPRE
Sbjct: 64  AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPRE 123

Query: 316 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKG 137
           DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKG
Sbjct: 124 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKG 183

Query: 136 SSNSYAIKKKDELERVAKSNR 74
           SSNSYAIKKKDELERVAKSNR
Sbjct: 184 SSNSYAIKKKDELERVAKSNR 204


>BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  283 bits (693), Expect = 3e-76
 Identities = 137/141 (97%), Positives = 139/141 (98%)
 Frame = -2

Query: 496 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 317
           AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPRE
Sbjct: 64  AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPRE 123

Query: 316 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKG 137
           DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKG
Sbjct: 124 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKG 183

Query: 136 SSNSYAIKKKDELERVAKSNR 74
           SSNSYAIKKKDELERVAKSNR
Sbjct: 184 SSNSYAIKKKDELERVAKSNR 204


>AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  283 bits (693), Expect = 3e-76
 Identities = 137/141 (97%), Positives = 139/141 (98%)
 Frame = -2

Query: 496 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 317
           AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPRE
Sbjct: 64  AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPRE 123

Query: 316 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKG 137
           DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKG
Sbjct: 124 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKG 183

Query: 136 SSNSYAIKKKDELERVAKSNR 74
           SSNSYAIKKKDELERVAKSNR
Sbjct: 184 SSNSYAIKKKDELERVAKSNR 204


>AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 204

 Score =  279 bits (684), Expect = 4e-75
 Identities = 135/141 (95%), Positives = 138/141 (97%)
 Frame = -2

Query: 496 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRE 317
           AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPRE
Sbjct: 64  AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPRE 123

Query: 316 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKG 137
           DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKG
Sbjct: 124 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKG 183

Query: 136 SSNSYAIKKKDELERVAKSNR 74
           SSN YAIKK+DELERVAKSNR
Sbjct: 184 SSNFYAIKKRDELERVAKSNR 204


>AB007149-1|BAA25815.1|   55|Homo sapiens ribosomal protein S5
           protein.
          Length = 55

 Score =  113 bits (272), Expect = 3e-25
 Identities = 54/55 (98%), Positives = 55/55 (100%)
 Frame = -2

Query: 238 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 74
           AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 1   AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 55


>AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 107

 Score = 92.3 bits (219), Expect = 9e-19
 Identities = 45/52 (86%), Positives = 46/52 (88%)
 Frame = -2

Query: 496 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 341
           AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE  L  LV A
Sbjct: 1   AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52


>BC000241-1|AAH00241.1|  242|Homo sapiens mitochondrial ribosomal
           protein S7 protein.
          Length = 242

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
 Frame = -2

Query: 487 PIVERLTNSLMMHGRNNGKKLMAVR----IVKHAFEIIHLLTGE-------NPLQVLVTA 341
           P++ + TN +M+ G     + + ++    + +  FE  H  + E       NP  +   A
Sbjct: 89  PVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYHAASAEEQATIERNPYTIFHQA 148

Query: 340 IINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVAD 161
           + N  P      I + G   +  V +   RR   A+  + T  R+   +    + E ++ 
Sbjct: 149 LKNCEPMIGLVPILKGGRFYQVPVPLPDRRRRFLAMKWMITECRDKKHQRT-LMPEKLSH 207

Query: 160 ELINAAKGSSNSYAIKKKDELERVAKSNR 74
           +L+ A         IK+K +L ++A++NR
Sbjct: 208 KLLEAFHNQGP--VIKRKHDLHKMAEANR 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,917,022
Number of Sequences: 237096
Number of extensions: 1396314
Number of successful extensions: 2388
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2388
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)