Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_D07
         (385 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087079-7|AAK27870.1|  145|Caenorhabditis elegans Hypothetical ...   127   2e-30
AC087079-8|AAK27871.1|   88|Caenorhabditis elegans Hypothetical ...    58   2e-09
AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin...    29   1.1  
U41274-6|AAA82462.1|  601|Caenorhabditis elegans Hypothetical pr...    27   3.4  
AL117206-9|CAL22706.1|  292|Caenorhabditis elegans Hypothetical ...    27   6.0  
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ...    27   6.0  
AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical ...    23   6.9  
AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical ...    23   6.9  
Z68315-5|CAE48501.1|  689|Caenorhabditis elegans Hypothetical pr...    26   7.9  
Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical pr...    26   7.9  
Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical pr...    26   7.9  

>AC087079-7|AAK27870.1|  145|Caenorhabditis elegans Hypothetical
           protein Y37E3.8a protein.
          Length = 145

 Score =  127 bits (307), Expect = 2e-30
 Identities = 60/126 (47%), Positives = 79/126 (62%)
 Frame = +1

Query: 7   MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 186
           MA + +KTRKLRGHVS                 NAGG+HHHRIN DKYHPGYFGK+GMR 
Sbjct: 1   MAHALRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRV 60

Query: 187 YHMRRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXXPKQ 366
           +H+ +N+ +CP +N+++LW+LV ++ R K   AT GK PVI+  K            P+ 
Sbjct: 61  FHLNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLLPET 117

Query: 367 PVIVKA 384
           P+IVKA
Sbjct: 118 PLIVKA 123


>AC087079-8|AAK27871.1|   88|Caenorhabditis elegans Hypothetical
           protein Y37E3.8b protein.
          Length = 88

 Score = 58.0 bits (134), Expect = 2e-09
 Identities = 27/69 (39%), Positives = 42/69 (60%)
 Frame = +1

Query: 178 MRNYHMRRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVKAXXXXXXXXXXX 357
           MR +H+ +N+ +CP +N+++LW+LV ++ R K   AT GK PVI+  K            
Sbjct: 1   MRVFHLNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLL 57

Query: 358 PKQPVIVKA 384
           P+ P+IVKA
Sbjct: 58  PETPLIVKA 66


>AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin
           protein 3 protein.
          Length = 409

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 12/49 (24%), Positives = 20/49 (40%)
 Frame = -1

Query: 271 LVLPAQRPESTVCQDLKQGRNPCFFSCGNFSYQVCQSTQGGTCPC*FCD 125
           L  P   P S VC+      +PC+++  N+ Y    +    T     C+
Sbjct: 130 LSAPCTEPRSYVCETPSTHEDPCYYNYNNYCYTFSHNQSSFTTAQAICE 178


>U41274-6|AAA82462.1|  601|Caenorhabditis elegans Hypothetical
           protein T04G9.6 protein.
          Length = 601

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 142 DKYHPGYFGKLGMRNYHMRRN 204
           D YH  YFGK G   YH+ RN
Sbjct: 405 DNYHNRYFGKAG---YHLTRN 422


>AL117206-9|CAL22706.1|  292|Caenorhabditis elegans Hypothetical
           protein Y67A10A.11 protein.
          Length = 292

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -1

Query: 193 CGNFSY-QVCQSTQGGTCPC 137
           C   +Y + C STQ G CPC
Sbjct: 45  CSQINYSRTCLSTQMGNCPC 64


>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
            protein Y55F3BR.2 protein.
          Length = 1594

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 205  CFFSCGNFSYQVCQSTQGGTCP 140
            C FS  N  Y  C + QG  CP
Sbjct: 946  CRFSQSNHKYYCCGNIQGSMCP 967


>AF100305-4|AAC68916.2|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3a protein.
          Length = 426

 Score = 23.4 bits (48), Expect(2) = 6.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 133 FCDGAHHQHYHVH 95
           + DG HH H H H
Sbjct: 410 YYDGGHHHHRHHH 422



 Score = 21.4 bits (43), Expect(2) = 6.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 118 HHQHYHVHQD 89
           HH+H+H H D
Sbjct: 417 HHRHHHHHCD 426


>AF100305-3|AAL65795.1|  426|Caenorhabditis elegans Hypothetical
           protein W04B5.3b protein.
          Length = 426

 Score = 23.4 bits (48), Expect(2) = 6.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 133 FCDGAHHQHYHVH 95
           + DG HH H H H
Sbjct: 410 YYDGGHHHHRHHH 422



 Score = 21.4 bits (43), Expect(2) = 6.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 118 HHQHYHVHQD 89
           HH+H+H H D
Sbjct: 417 HHRHHHHHCD 426


>Z68315-5|CAE48501.1|  689|Caenorhabditis elegans Hypothetical
           protein F28C6.4b protein.
          Length = 689

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = -3

Query: 317 TMLITGTLPSVADAYFSLACSETRVHS-LSRF-KTGQKSLFL--LMW*FLIP-SLPKYPG 153
           T  +TGTLPS      +LA +E +  + +SR  K G+K  F     W  L+P S  K+ G
Sbjct: 105 TAYLTGTLPSFGTVLTNLATAEMKTANWISRIQKIGKKVHFFGDDTWIRLLPRSFEKFEG 164


>Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical
           protein F28C6.4a protein.
          Length = 745

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = -3

Query: 317 TMLITGTLPSVADAYFSLACSETRVHS-LSRF-KTGQKSLFL--LMW*FLIP-SLPKYPG 153
           T  +TGTLPS      +LA +E +  + +SR  K G+K  F     W  L+P S  K+ G
Sbjct: 105 TAYLTGTLPSFGTVLTNLATAEMKTANWISRIQKIGKKVHFFGDDTWIRLLPRSFEKFEG 164


>Z66498-2|CAA91291.2|  419|Caenorhabditis elegans Hypothetical
           protein M195.2 protein.
          Length = 419

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 244 STVCQDLKQGRNPCFFSCGNFSYQVCQS 161
           S VCQ  +   + C  SC     +VCQS
Sbjct: 106 SNVCQQKQYSSSQCASSCNRSCSRVCQS 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,834,358
Number of Sequences: 27780
Number of extensions: 154845
Number of successful extensions: 540
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)