Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_D03
(285 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001673-1|AAN71428.1| 550|Drosophila melanogaster RE50361p pro... 28 1.6
AY061554-1|AAL29102.1| 299|Drosophila melanogaster LP08921p pro... 28 1.6
AE014134-2616|AAF53475.1| 550|Drosophila melanogaster CG18480-P... 28 1.6
BT001295-1|AAN71050.1| 536|Drosophila melanogaster AT11052p pro... 28 2.1
AE013599-3570|AAM68240.2| 539|Drosophila melanogaster CG30416-P... 28 2.1
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 27 2.8
X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein ... 27 3.7
X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein ... 27 3.7
AY102681-1|AAM27510.1| 1034|Drosophila melanogaster LD22374p pro... 27 3.7
AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-P... 27 3.7
AE013599-48|ABI31021.1| 1034|Drosophila melanogaster CG3107-PC, ... 27 3.7
AE013599-47|AAM68370.1| 1034|Drosophila melanogaster CG3107-PB, ... 27 3.7
AE013599-46|AAF57348.2| 1034|Drosophila melanogaster CG3107-PA, ... 27 3.7
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 27 4.9
AY071287-1|AAL48909.1| 533|Drosophila melanogaster RE31310p pro... 26 8.6
AY061380-1|AAL28928.1| 731|Drosophila melanogaster LD30319p pro... 26 8.6
AY051807-1|AAK93231.1| 381|Drosophila melanogaster LD32040p pro... 26 8.6
AF178442-1|AAF01024.1| 205|Drosophila melanogaster MSB1L protein. 26 8.6
AE014296-63|AAN11432.1| 533|Drosophila melanogaster CG32476-PA ... 26 8.6
AE014134-3142|AAF53832.2| 381|Drosophila melanogaster CG10364-P... 26 8.6
AE013599-1155|AAF58766.2| 731|Drosophila melanogaster CG16728-P... 26 8.6
>BT001673-1|AAN71428.1| 550|Drosophila melanogaster RE50361p
protein.
Length = 550
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +2
Query: 110 TTSRAVM*QPYRP*DGPTIRLCDVPHASATYRTSKLKTGS 229
T S AV+ QPY P D RL P S YRT T +
Sbjct: 449 TQSHAVVRQPYGPQDNFVSRLFGRPARSQYYRTINQNTAT 488
>AY061554-1|AAL29102.1| 299|Drosophila melanogaster LP08921p
protein.
Length = 299
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +2
Query: 110 TTSRAVM*QPYRP*DGPTIRLCDVPHASATYRTSKLKTGS 229
T S AV+ QPY P D RL P S YRT T +
Sbjct: 198 TQSHAVVRQPYGPQDNFVSRLFGRPARSQYYRTINQNTAT 237
>AE014134-2616|AAF53475.1| 550|Drosophila melanogaster CG18480-PA
protein.
Length = 550
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +2
Query: 110 TTSRAVM*QPYRP*DGPTIRLCDVPHASATYRTSKLKTGS 229
T S AV+ QPY P D RL P S YRT T +
Sbjct: 449 TQSHAVVRQPYGPQDNFVSRLFGRPARSQYYRTINQNTAT 488
>BT001295-1|AAN71050.1| 536|Drosophila melanogaster AT11052p
protein.
Length = 536
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = +3
Query: 69 RKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGCATYRMLLQRTERRNLKPEVHQLSNV 248
++C V C QQ +C P P C T+ + +Q E +PE ++++
Sbjct: 109 QQCSQQSPCVSRCGQQNRQNCFQPPCPNWTRPCCCITHEVGVQTDEMDECEPEYIAITDI 168
>AE013599-3570|AAM68240.2| 539|Drosophila melanogaster CG30416-PA
protein.
Length = 539
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = +3
Query: 69 RKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGCATYRMLLQRTERRNLKPEVHQLSNV 248
++C V C QQ +C P P C T+ + +Q E +PE ++++
Sbjct: 109 QQCSQQSPCVSRCGQQNRQNCFQPPCPNWTRPCCCITHEVGVQTDEMDECEPEYIAITDI 168
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 72 KCPAGEHSVLYC--PQQAEPSCDNPTVHEMDPPSGCATYRMLLQRTERRNL 218
KC AGEH C P+ +C N + + GC TY+ Q+ N+
Sbjct: 669 KC-AGEHLSSCCTKPRTTPATCVNCSGQHISAYKGCPTYKAEKQKLAANNI 718
>X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein
protein.
Length = 1332
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3
Query: 111 QQAEPSCDNPTVHE 152
++A+P+CDNPTV E
Sbjct: 1038 KKAKPACDNPTVEE 1051
>X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein
protein.
Length = 1332
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3
Query: 111 QQAEPSCDNPTVHE 152
++A+P+CDNPTV E
Sbjct: 1038 KKAKPACDNPTVEE 1051
>AY102681-1|AAM27510.1| 1034|Drosophila melanogaster LD22374p
protein.
Length = 1034
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 10 PCA*LCWLR*SPSTVKEFL*ENARLVNTQCCTAHNKQSRHVTTLPSMRWTHHQAVRRTAC 189
PC + +R P K F+ +N + V TQ C + + + ++ H+ +
Sbjct: 583 PCLTMNDVRDPPKWPKLFI-QNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPL 641
Query: 190 FCNV 201
FCNV
Sbjct: 642 FCNV 645
>AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-PA
protein.
Length = 1332
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3
Query: 111 QQAEPSCDNPTVHE 152
++A+P+CDNPTV E
Sbjct: 1038 KKAKPACDNPTVEE 1051
>AE013599-48|ABI31021.1| 1034|Drosophila melanogaster CG3107-PC,
isoform C protein.
Length = 1034
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 10 PCA*LCWLR*SPSTVKEFL*ENARLVNTQCCTAHNKQSRHVTTLPSMRWTHHQAVRRTAC 189
PC + +R P K F+ +N + V TQ C + + + ++ H+ +
Sbjct: 583 PCLTMNDVRDPPKWPKLFI-QNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPL 641
Query: 190 FCNV 201
FCNV
Sbjct: 642 FCNV 645
>AE013599-47|AAM68370.1| 1034|Drosophila melanogaster CG3107-PB,
isoform B protein.
Length = 1034
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 10 PCA*LCWLR*SPSTVKEFL*ENARLVNTQCCTAHNKQSRHVTTLPSMRWTHHQAVRRTAC 189
PC + +R P K F+ +N + V TQ C + + + ++ H+ +
Sbjct: 583 PCLTMNDVRDPPKWPKLFI-QNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPL 641
Query: 190 FCNV 201
FCNV
Sbjct: 642 FCNV 645
>AE013599-46|AAF57348.2| 1034|Drosophila melanogaster CG3107-PA,
isoform A protein.
Length = 1034
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 10 PCA*LCWLR*SPSTVKEFL*ENARLVNTQCCTAHNKQSRHVTTLPSMRWTHHQAVRRTAC 189
PC + +R P K F+ +N + V TQ C + + + ++ H+ +
Sbjct: 583 PCLTMNDVRDPPKWPKLFI-QNVQNVRTQICKVPTNEITYFKCMFNITGLSHEETQLMPL 641
Query: 190 FCNV 201
FCNV
Sbjct: 642 FCNV 645
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 72 KCPAGEHSVLYC--PQQAEPSCDNPTVHEMDPPSGCATYRMLLQRTERRNL 218
KC AG+H C P+ +C N + + GC TY+ Q+ N+
Sbjct: 677 KC-AGDHLSSCCTKPRSTPATCVNCSGEHISAYKGCPTYKAEKQKLAANNI 726
>AY071287-1|AAL48909.1| 533|Drosophila melanogaster RE31310p
protein.
Length = 533
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 66 IRKC-PAGEHSVLYCPQQAEPSCDN 137
+RKC P GE+ +Y Q++ CDN
Sbjct: 117 LRKCCPHGENLNIYRENQSDSMCDN 141
>AY061380-1|AAL28928.1| 731|Drosophila melanogaster LD30319p
protein.
Length = 731
Score = 25.8 bits (54), Expect = 8.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 82 LVNTQCCTAHNKQSRHVTTLPSMR 153
L+ CC+ H RH++ + S+R
Sbjct: 67 LLCADCCSVHRSLGRHISIVKSLR 90
>AY051807-1|AAK93231.1| 381|Drosophila melanogaster LD32040p
protein.
Length = 381
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 153 MDP--PSGCATYRMLLQRTERRNLKPEVHQLSNVNIILYLKKSII 281
+DP P+GC T LQ ++ R + E H ++ N L+K ++
Sbjct: 46 LDPRSPNGCRTPLTFLQASKPRVEEEEQHVTTSENAFSMLRKRLL 90
>AF178442-1|AAF01024.1| 205|Drosophila melanogaster MSB1L protein.
Length = 205
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 153 MDP--PSGCATYRMLLQRTERRNLKPEVHQLSNVNIILYLKKSII 281
+DP P+GC T LQ ++ R + E H ++ N L+K ++
Sbjct: 39 LDPRSPNGCRTPLTFLQASKPRVEEEEQHVTTSENAFSMLRKRLL 83
>AE014296-63|AAN11432.1| 533|Drosophila melanogaster CG32476-PA
protein.
Length = 533
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 66 IRKC-PAGEHSVLYCPQQAEPSCDN 137
+RKC P GE+ +Y Q++ CDN
Sbjct: 117 LRKCCPHGENLNIYRENQSDSMCDN 141
>AE014134-3142|AAF53832.2| 381|Drosophila melanogaster CG10364-PA
protein.
Length = 381
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 153 MDP--PSGCATYRMLLQRTERRNLKPEVHQLSNVNIILYLKKSII 281
+DP P+GC T LQ ++ R + E H ++ N L+K ++
Sbjct: 46 LDPRSPNGCRTPLTFLQASKPRVEEEEQHVTTSENAFSMLRKRLL 90
>AE013599-1155|AAF58766.2| 731|Drosophila melanogaster CG16728-PA
protein.
Length = 731
Score = 25.8 bits (54), Expect = 8.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 82 LVNTQCCTAHNKQSRHVTTLPSMR 153
L+ CC+ H RH++ + S+R
Sbjct: 67 LLCADCCSVHRSLGRHISIVKSLR 90
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,741,927
Number of Sequences: 53049
Number of extensions: 282086
Number of successful extensions: 823
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 465714480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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