Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_D01
         (96 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0225 + 13960843-13962417                                         31   0.17 
08_01_0338 + 3000897-3002447                                           26   4.8  

>01_03_0225 + 13960843-13962417
          Length = 524

 Score = 30.7 bits (66), Expect = 0.17
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = -3

Query: 82  LSHAALDERALSGRRLPAG 26
           LSHAA++E +L G R+PAG
Sbjct: 389 LSHAAVEETSLDGHRIPAG 407


>08_01_0338 + 3000897-3002447
          Length = 516

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 82  LSHAALDERALSGRRLPAGAP 20
           L HA  DE  L G R+PA  P
Sbjct: 378 LPHAVEDETTLDGYRVPANTP 398


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,451,693
Number of Sequences: 37544
Number of extensions: 25572
Number of successful extensions: 153
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 14,793,348
effective HSP length: 13
effective length of database: 14,305,276
effective search space used: 257494968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)