Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_D01
         (96 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    19   4.1  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    19   4.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   7.1  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +2

Query: 11   RRVWRTGREPPP 46
            R  WR  + PPP
Sbjct: 1347 RTAWRQQQPPPP 1358


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
          protein.
          Length = 208

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 54 R*AGGGSRPVRQTRRHE 4
          R  GG  +P+R+ R+ E
Sbjct: 12 RATGGKRKPIRKKRKFE 28


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 20  WRTGREPPPAQRALVK 67
           W +GR    AQR +++
Sbjct: 270 WDSGRRKSAAQRNVIR 285


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,919
Number of Sequences: 438
Number of extensions: 116
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 13
effective length of database: 140,649
effective search space used:  2531682
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)