Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_C23
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    29   0.048
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.6  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 28.7 bits (61), Expect = 0.048
 Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = +1

Query: 121 CLGQSTKVFLEKTSKGIKQYNIRPIDPWFISSLDVLADE-DMRLLFHFNNVSXDRL-KNQ 294
           C+ ++ +  +   + G+K + I PI+P  + S+ +   +  + L   + N+    L KN 
Sbjct: 43  CIAEAVRDAVVSLAGGLKSFKILPIEPLAVDSVKIGESQGSVTLRQEYKNIKLYGLTKNL 102

Query: 295 KIFDFRID 318
           +I ++ ID
Sbjct: 103 EIKNYNID 110


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor
          protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 25 MNPVKIIFFLTFVKSIFCD 81
          M PV+ IFFL+ V  +  D
Sbjct: 1  MFPVRSIFFLSLVSVVLLD 19


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -2

Query: 303 KDFLVLQXVXGHIIKVKQQTHILVSQDV*G 214
           + F + Q     I++ +QQ HI+  + + G
Sbjct: 392 RSFALKQMKKAQIVETRQQQHIMSEKRIMG 421


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,846
Number of Sequences: 438
Number of extensions: 3636
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)