Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_C18
         (611 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017725-1|AAH17725.1|  192|Homo sapiens chromosome 20 open read...    38   0.028
AL121914-1|CAC12716.1|  192|Homo sapiens chromosome 20 open read...    38   0.028
AK075565-1|BAC11704.1|  192|Homo sapiens protein ( Homo sapiens ...    38   0.028
AJ311123-1|CAC67490.1|  192|Homo sapiens hypothetical protein pr...    38   0.028
X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  33   0.60 
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                33   0.60 
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    33   0.60 

>BC017725-1|AAH17725.1|  192|Homo sapiens chromosome 20 open reading
           frame 108 protein.
          Length = 192

 Score = 37.9 bits (84), Expect = 0.028
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 494 SGVDLVALLKYLNISEGTILKAAGSNAGTFVVAYGVHKL 610
           SGVD+ A+L  L   E  +     +   TFVVAY +HKL
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKL 159


>AL121914-1|CAC12716.1|  192|Homo sapiens chromosome 20 open reading
           frame 108 protein.
          Length = 192

 Score = 37.9 bits (84), Expect = 0.028
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 494 SGVDLVALLKYLNISEGTILKAAGSNAGTFVVAYGVHKL 610
           SGVD+ A+L  L   E  +     +   TFVVAY +HKL
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKL 159


>AK075565-1|BAC11704.1|  192|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0265 fis, clone NT2RP3003235. ).
          Length = 192

 Score = 37.9 bits (84), Expect = 0.028
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 494 SGVDLVALLKYLNISEGTILKAAGSNAGTFVVAYGVHKL 610
           SGVD+ A+L  L   E  +     +   TFVVAY +HKL
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKL 159


>AJ311123-1|CAC67490.1|  192|Homo sapiens hypothetical protein
           protein.
          Length = 192

 Score = 37.9 bits (84), Expect = 0.028
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 494 SGVDLVALLKYLNISEGTILKAAGSNAGTFVVAYGVHKL 610
           SGVD+ A+L  L   E  +     +   TFVVAY +HKL
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKL 159


>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 33.5 bits (73), Expect = 0.60
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 138   PTNVVDINSTEMG-RFSPSRDRDISGPVINYFYEKQDVSLSTIDITS 275
             P N++D+    M   + P +D D   PVINY  EKQD    T  + S
Sbjct: 11113 PINILDVTPEHMTISWQPPKD-DGGSPVINYIVEKQDTRKDTWGVVS 11158


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 33.5 bits (73), Expect = 0.60
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 138   PTNVVDINSTEMG-RFSPSRDRDISGPVINYFYEKQDVSLSTIDITS 275
             P N++D+    M   + P +D D   PVINY  EKQD    T  + S
Sbjct: 18537 PINILDVTPEHMTISWQPPKD-DGGSPVINYIVEKQDTRKDTWGVVS 18582


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 33.5 bits (73), Expect = 0.60
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 138   PTNVVDINSTEMG-RFSPSRDRDISGPVINYFYEKQDVSLSTIDITS 275
             P N++D+    M   + P +D D   PVINY  EKQD    T  + S
Sbjct: 11113 PINILDVTPEHMTISWQPPKD-DGGSPVINYIVEKQDTRKDTWGVVS 11158


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,219,103
Number of Sequences: 237096
Number of extensions: 1765486
Number of successful extensions: 3019
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3019
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)