Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_C15
         (590 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   3.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.9  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   3.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.2  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   9.0  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   9.0  

>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 133 RFVIEDRINCTKDVVIIYDWK 195
           RF+ +   N  KD  +I DWK
Sbjct: 455 RFIAQHIKNADKDNEVIEDWK 475


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 430 YEISGSGRKAVVKFLEFDLEGTYPDCKYDNL-SITSD 537
           Y++ G+G K ++K +++   G Y  C+  ++  IT D
Sbjct: 450 YDLIGNGTKLIIKNVDYADTGAYM-CQASSIGGITRD 485


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 544 NYYQKLWTNYH 512
           NYY  L+T YH
Sbjct: 716 NYYANLYTKYH 726


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 481 DLEGTYPDCKYDNLSITSDSNFNYY 555
           DL   YP  ++D L + ++ +  YY
Sbjct: 191 DLREYYPSVEWDILGVPAERHKKYY 215


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 441  RQW*KGRGQVSRIRFRRNI 497
            R+W KG+G+  R    RNI
Sbjct: 1343 REWYKGQGEQIRTDSTRNI 1361


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 441  RQW*KGRGQVSRIRFRRNI 497
            R+W KG+G+  R    RNI
Sbjct: 1339 REWYKGQGEQIRTDSTRNI 1357


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 332 THSALNPSRLVSASVRNTTFI 270
           T++ LNP+  +  +  NTT +
Sbjct: 326 TNTELNPNTFILVAENNTTMV 346


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 157 NCTKDVVIIYDWKDDQY 207
           N T  + +IY+WK   Y
Sbjct: 24  NLTNSLKVIYEWKYIDY 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,253
Number of Sequences: 438
Number of extensions: 4044
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)