Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_C10
(588 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 229 1e-60
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 229 1e-60
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 223 8e-59
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 104 6e-23
07_03_1357 - 25982861-25983068,25983354-25983361 74 1e-13
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028 32 0.30
12_02_0352 - 17862577-17863528,17864076-17864827 31 0.52
12_02_0441 + 19115990-19116478 31 0.68
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435... 30 1.2
07_01_0157 + 1109499-1111022 30 1.6
07_03_0366 + 17321948-17322331 29 2.1
02_05_1008 - 33461225-33462334 29 2.7
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 29 3.6
10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022 28 4.8
03_02_0167 - 6088818-6089870 28 4.8
01_05_0369 - 21468204-21468595,21471417-21471606,21471680-214718... 28 6.3
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 229 bits (560), Expect = 1e-60
Identities = 108/164 (65%), Positives = 131/164 (79%)
Frame = -3
Query: 535 KIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXLDE 356
K++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG A L +
Sbjct: 31 KLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRRMNRYGLLAD 90
Query: 355 KQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 176
Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q+VNIPSF+V
Sbjct: 91 GQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMV 150
Query: 175 RLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDEEED 44
R++S KHIDFSL SPFGGG PGRVKRKN +K GGG +EE++
Sbjct: 151 RVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGGGDGEEEDE 194
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 229 bits (560), Expect = 1e-60
Identities = 108/164 (65%), Positives = 131/164 (79%)
Frame = -3
Query: 535 KIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXLDE 356
K++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG A L +
Sbjct: 54 KLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRRMNRYGLLAD 113
Query: 355 KQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 176
Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q+VNIPSF+V
Sbjct: 114 GQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMV 173
Query: 175 RLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDEEED 44
R++S KHIDFSL SPFGGG PGRVKRKN +K GGG +EE++
Sbjct: 174 RVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGGGDGEEEDE 217
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 223 bits (545), Expect = 8e-59
Identities = 106/156 (67%), Positives = 126/156 (80%)
Frame = -3
Query: 535 KIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXLDE 356
K++GEYGLR KRE+WRV+Y L+RIR AR LLTL+EK+P+R+FEG A L +
Sbjct: 247 KLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRRIFEGEALLRRMNRYGLLAD 306
Query: 355 KQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 176
Q KLDYVL L +E+FL RRLQT VFKAG+AKSIHHAR+LIRQRHIRV +Q+VNIPSF+V
Sbjct: 307 GQNKLDYVLALTVENFLARRLQTLVFKAGMAKSIHHARVLIRQRHIRVGRQIVNIPSFMV 366
Query: 175 RLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGG 68
R++S KHIDFSL SPFGGG PGRVKRKN +K GGG
Sbjct: 367 RVESEKHIDFSLTSPFGGGPPGRVKRKNQKKASGGG 402
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 104 bits (249), Expect = 6e-23
Identities = 57/106 (53%), Positives = 69/106 (65%)
Frame = -3
Query: 535 KIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXLDE 356
K+ GEYGLR+K E+WRV+ ELLTL+EK+P+R+FEG A L E
Sbjct: 31 KLYGEYGLRSKCELWRVQ-----------ELLTLDEKNPRRIFEGEALLRHMNRYGLLGE 79
Query: 355 KQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHI 218
Q KLDYVL L +E+FL+ RLQT VFK G KSIHH +LIRQ HI
Sbjct: 80 GQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHVLIRQHHI 125
>07_03_1357 - 25982861-25983068,25983354-25983361
Length = 71
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = -3
Query: 217 RVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDEEED 44
RV +Q+VNIPSFIVRL+S KHI FSL SP GG RVKRKN +K GGG +EEE+
Sbjct: 3 RVGRQLVNIPSFIVRLESEKHIAFSLTSPLGGSPAVRVKRKN-QKASGGGGDGEEEEE 59
>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
Length = 157
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 301 RRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 176
RRL T + K A+ + A I+Q H+RV + V P+F+V
Sbjct: 82 RRLATVMVKLKFAEHLKEAVTYIQQGHVRVGPETVTDPAFLV 123
>12_02_0352 - 17862577-17863528,17864076-17864827
Length = 567
Score = 31.5 bits (68), Expect = 0.52
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 395 SIAFKQSLRILLLECQQFTGSLTDASERVLDAPHFTLVAETILSDDLQLPDQD 553
S +F L + L E G++ D + V+ + HF + AE + + +QLP QD
Sbjct: 217 SRSFSVGLMMRLSESTDVLGTMIDCMQSVVTS-HFRVAAEEVRKELIQLPTQD 268
>12_02_0441 + 19115990-19116478
Length = 162
Score = 31.1 bits (67), Expect = 0.68
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = -3
Query: 193 IPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDEEED 44
+ +F++RL K I K+ GGG GR K+ KG+GGG ++EEE+
Sbjct: 108 VKTFVIRLVE-KVIGLE-KNGRGGGGGGRKKK---GKGKGGGGEDEEEEE 152
>01_07_0290 - 42542201-42542359,42542443-42542551,42542729-42543516,
42543601-42543744,42543840-42544013,42544056-42544369,
42544467-42544636,42544916-42545043,42545125-42545185,
42545473-42545642,42545783-42547387,42547479-42547631,
42547747-42547905,42548066-42548236,42548357-42548404,
42548509-42548624,42548885-42549029,42549122-42549220
Length = 1570
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 127 GGGRPGRVKRKNLRKGQGGG 68
G RPG RKN +GQGGG
Sbjct: 1369 GSSRPGEWNRKNNNRGQGGG 1388
>07_01_0157 + 1109499-1111022
Length = 507
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 404 FKQSLRILLLECQQFTGSLTDASERVLDAPHFTLVAETILSDDLQLPDQD 553
F + + L EC G+ + L APHF ET+ + QLP QD
Sbjct: 215 FFLGMMLQLSECTNIVGTAIKCLQ--LFAPHFKSTTETVRKELSQLPTQD 262
>07_03_0366 + 17321948-17322331
Length = 127
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 163 GKHIDFSLKSPFGGGRPGRVKRKNLRKGQGGGATNDE 53
G ++ +S GGG R +R+ R+G GGGA E
Sbjct: 32 GDTVEAERQSRHGGGGRRRRQRRGRRRGSGGGAMEAE 68
>02_05_1008 - 33461225-33462334
Length = 369
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = -3
Query: 358 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFI 179
E Q+ L+Y+ G +E RR+ ++ F A +A+ + + +RHI V + + PS +
Sbjct: 163 ELQILLEYMDGGSLEG---RRIASEAFLADVARQVLSGIAYLHRRHI-VHRDIK--PSNL 216
Query: 178 VRLDSGKHIDFSLKSPFGGGR 116
+ +DSG+ + + FG GR
Sbjct: 217 L-IDSGRRVKI---ADFGVGR 233
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 319 IEDFLERRLQTQVFKAGLAKSIHHAR 242
+ED+ E L T F A L KS+H AR
Sbjct: 110 VEDYFEGSLHTLDFLAALDKSLHRAR 135
>10_02_0155 + 5937974-5939419,5939678-5939867,5940895-5941022
Length = 587
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 287 SGVQGWSCEVNPSCPHLDQTEAY 219
+GV WS VNPS +L TEA+
Sbjct: 107 AGVSTWSLRVNPSSGNLHPTEAH 129
>03_02_0167 - 6088818-6089870
Length = 350
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 139 KSPFGGGRPGRVKRKNLRKGQGGGATNDEEED 44
K P GGG GR + G+ GG ++EEED
Sbjct: 103 KLPAGGGHRGR----QVLSGRSGGGVDEEEED 130
>01_05_0369 -
21468204-21468595,21471417-21471606,21471680-21471867,
21484028-21484580
Length = 440
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 124 GGRPGRVKRKNLRKGQGGGATNDEEE 47
GGRP + K + G+GG T DEEE
Sbjct: 169 GGRPAPEREKE-KAGRGGPLTGDEEE 193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,610,499
Number of Sequences: 37544
Number of extensions: 303548
Number of successful extensions: 1188
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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