Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_C05
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1152 + 9170628-9171899 75 5e-14
01_06_0824 - 32243495-32244319,32244449-32244859 73 2e-13
11_02_0011 - 7337618-7338496,7338596-7338991 72 5e-13
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 71 6e-13
04_04_0619 + 26652923-26653267,26653440-26654273 67 1e-11
11_02_0012 - 7346282-7347136,7347234-7347593 66 3e-11
11_01_0750 - 6315126-6315896,6316371-6316784 66 3e-11
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 60 1e-09
11_02_0014 - 7352619-7352918,7353173-7353418 58 6e-09
11_01_0771 + 6453130-6454488 57 1e-08
11_01_0767 + 6438648-6438809,6439146-6440000 56 3e-08
05_06_0044 - 25150322-25151260 44 1e-04
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 37 0.013
04_04_0050 - 22360294-22361804,22362087-22362378,22363367-223634... 29 2.6
04_03_0260 - 13580396-13582990 29 3.4
04_03_0256 - 13564070-13564456,13564543-13565299,13565734-135665... 29 3.4
06_03_0551 - 22027441-22028224,22029015-22029344,22029510-220297... 28 7.9
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 28 7.9
02_01_0074 + 519401-519512,519513-519548,519647-519706,519785-51... 28 7.9
>01_01_1152 + 9170628-9171899
Length = 423
Score = 74.9 bits (176), Expect = 5e-14
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Frame = +3
Query: 126 KSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN-DNVTKAVFTDLNQKVRSIKGVD 302
++ I+S S LA +A + GE+ ELL + P+ + ++ T L ++R +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 303 LKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHTNKRIX 479
A V++ G L +FA + + + + +F E+A +N +V D T I
Sbjct: 119 F--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 480 NLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDRPFHVNKD*TIQVPTM 638
+++ P+S+DSST VL NA++FKG+W F T PFH+ ++ P M
Sbjct: 177 DVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFM 229
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 72.9 bits (171), Expect = 2e-13
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 9/181 (4%)
Frame = +3
Query: 123 DKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN--------DNVTKAVFTDLNQK 278
DK++ +S S+ LA L + GE+ D+++ + +V D +
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 279 VRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVE 455
G ++ AN V++ L +A V D + +E + ++F K EEA IN W E
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 456 DHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDRPFHVNKD*TIQVPT 635
T RI + + ++D +T VL NA+YFKG W+ FD T D F++ + P
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPF 210
Query: 636 M 638
M
Sbjct: 211 M 211
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 71.7 bits (168), Expect = 5e-13
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Frame = +3
Query: 123 DKSVILSAFSVMIPLAQLAIASTGESHDELLK-----AIDFPNDNVTKAVFTDLNQKVRS 287
+K+++ S S+ LA +A + G + DELL ++D ++V +AV L + S
Sbjct: 30 NKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESAS 89
Query: 288 IKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHT 464
G + A V+ EL + + + + + NF + + + IN WV T
Sbjct: 90 -GGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKAT 148
Query: 465 NKRIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDRPFHVNKD*TIQVPTMVQ 644
NK I ++ S+ T VLVNAIYFKG W + F + T FH ++ VP M
Sbjct: 149 NKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSS 208
Query: 645 RGD 653
R D
Sbjct: 209 RED 211
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 71.3 bits (167), Expect = 6e-13
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +3
Query: 411 GKNEEAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQD 590
GK E A+ +N+WVE T+ I ++ P S+D +T+ VL NA+YFKG+W + FD T+D
Sbjct: 208 GKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKD 267
Query: 591 RPFHVNKD*TIQVPTM 638
FH+ ++Q P M
Sbjct: 268 GEFHLLDGKSVQAPFM 283
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/75 (38%), Positives = 45/75 (60%)
Frame = +3
Query: 423 EAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDRPFH 602
E +N+WV+ T+ I N+ P S++ +T+ VL NA+YFKG+W + FD T+D FH
Sbjct: 464 EVLGQVNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFH 523
Query: 603 VNKD*TIQVPTMVQR 647
+ ++Q P M R
Sbjct: 524 LLDGESVQAPFMSTR 538
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 66.9 bits (156), Expect = 1e-11
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
Frame = +3
Query: 135 ILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKGVDLKLA 314
+ S + LA LA + GE+ +LL + + + A L ++R+ L A
Sbjct: 23 MFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP--QLSFA 80
Query: 315 NKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTNKRIXNLVD 491
+++ L +F + + ++++F AA +N ++ TN R+ N +
Sbjct: 81 AGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLNNTIS 140
Query: 492 PSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDRPFHVNKD*TIQVP 632
P + SST+CVL NA++FK +W F+ TQ R FH + VP
Sbjct: 141 PGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVP 187
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 65.7 bits (153), Expect = 3e-11
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Frame = +3
Query: 117 NPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKG 296
N +++V+ S S+ LA +A + G + DEL+ + A DL + VR +
Sbjct: 28 NSNRNVVFSPVSLYAALALVASGARGTTLDELVALLG-------AASLDDLEESVR--RA 78
Query: 297 VDLKLANKVYIANGNELNDQFAVV--SRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTN 467
V++ LA++ + G ++ V R + +F + +++ IN WV TN
Sbjct: 79 VEVGLADESE-SGGPRVSYACGVWHDERLALKPAYRAADFQRQPKSSRKKINKWVSKATN 137
Query: 468 KRIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDRPFHVNKD*TIQVPTMVQR 647
K I ++ S+ T VLVNAIYFKG W + F +E T FH ++ P M R
Sbjct: 138 KLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSR 197
Query: 648 GD 653
D
Sbjct: 198 ED 199
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +3
Query: 294 GVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVEDHTNK 470
G L A V+ L+ +F ++ +V+ S + +F K E+A + IN+WV+D T
Sbjct: 97 GPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKG 156
Query: 471 RIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDRPFHVNKD*TIQVP 632
+ L+ ++D +T VL +A+YF+G W D D T ++ F+ +++VP
Sbjct: 157 TVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVP 210
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = +3
Query: 423 EAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDRPFH 602
E A+ +N+WV+ T+ I ++ P S+D +T+ VL NA+YFKG+W + FD T+D F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 603 VNKD*TIQVPTM 638
+ ++ P M
Sbjct: 64 LLDGKSVLAPFM 75
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 58.0 bits (134), Expect = 6e-09
Identities = 31/72 (43%), Positives = 37/72 (51%)
Frame = +3
Query: 438 INTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDRPFHVNKD* 617
IN WV TNK I ++ S+ T VLVNAIYFKG W D F +E T FH
Sbjct: 90 INEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLDGS 149
Query: 618 TIQVPTMVQRGD 653
++ V M R D
Sbjct: 150 SVNVRFMRSRED 161
>11_01_0771 + 6453130-6454488
Length = 452
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = +3
Query: 414 KNEEAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDR 593
K EEA IN W T K I +++ P S+ T VL NAIYFKG W F++ T+ +
Sbjct: 169 KAEEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERK 228
Query: 594 PFH 602
PF+
Sbjct: 229 PFY 231
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/80 (40%), Positives = 41/80 (51%)
Frame = +3
Query: 423 EAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDRPFH 602
EA IN WV T I ++ P S T+ V+ NAIYFKG W FDK T +R F
Sbjct: 57 EARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREFR 116
Query: 603 VNKD*TIQVPTMVQRGDFAY 662
+++VP M QR +Y
Sbjct: 117 RLDGSSVEVPFM-QRPSGSY 135
>05_06_0044 - 25150322-25151260
Length = 312
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Frame = +3
Query: 321 VYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIXNLVDPSS 500
V++ LN FA + VF + V++ G A IN W T + +++ S
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRSA--GNPAAARAEINEWFSSQTGGFVKDILSNSI 60
Query: 501 LDS-----------STQCVLVNAIYFKGSWKDXFDKELTQDRPFHVNKD*TIQVPTMVQR 647
D S L N++YF W F LT++ FHV+ D ++VP M
Sbjct: 61 DDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFMAGS 120
Query: 648 GDFAY 662
A+
Sbjct: 121 HQHAF 125
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 195 ESHDELLKAIDFPNDNVTKAVFTDLNQKVRSI--KGVDLKLANKVYIANGNELNDQFAVV 368
+ HD LLK+ NDN+TK + NQ + + KG D K +KV N+Q +
Sbjct: 467 KEHDTLLKSSVELNDNLTKTA-EERNQILECLKEKGGDNKALHKVIARLQRISNEQEKTI 525
Query: 369 S--RDVFNSEVQNLNFGKNEEAANI 437
+ R FN+E++N + G +E + +
Sbjct: 526 TGLRQGFNAELENKSLGTSESISRM 550
>04_04_0050 -
22360294-22361804,22362087-22362378,22363367-22363420,
22363627-22363718,22364713-22364915,22365892-22366133,
22366205-22366330,22366800-22366907,22367394-22367457,
22367543-22367681,22367867-22368038,22368198-22368482
Length = 1095
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +3
Query: 435 IINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKELTQDRPFHVNKD 614
I + + D T + +++ P + + Q KG +K+ F K+ T D P H +KD
Sbjct: 301 IASKGLRDDTTCIVIDIIPPEKISPTVQPAKKAG---KGLFKNIFYKKATSDSPCHADKD 357
Query: 615 *TIQVPTMVQ 644
Q P +V+
Sbjct: 358 QCTQ-PDLVE 366
>04_03_0260 - 13580396-13582990
Length = 864
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 357 FAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIXNLVDPSSLD 506
F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 737 FGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNNQLIDMIDKHSSD 785
>04_03_0256 -
13564070-13564456,13564543-13565299,13565734-13566535,
13566884-13566917
Length = 659
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 354 QFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIXNLVDPSSLD 506
+F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 531 KFGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNSQLIDMIDKHSND 580
>06_03_0551 -
22027441-22028224,22029015-22029344,22029510-22029778,
22030530-22031453,22037761-22038360,22040049-22040267
Length = 1041
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/65 (20%), Positives = 33/65 (50%)
Frame = +3
Query: 402 LNFGKNEEAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLVNAIYFKGSWKDXFDKEL 581
L G++ E + N ++D ++ ++V + + + LV+ +Y++ + FD++
Sbjct: 100 LIIGRDSEVDKLFNL-IKDRSHTNTPHVVSVWGIPGTGRTALVSNVYYRCYYDTQFDRQT 158
Query: 582 TQDRP 596
T + P
Sbjct: 159 TVNMP 163
>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 442 LIMLAASSF--LPKFKFCTSELNTSLDTTAN*SFNSLPLAMYTLLA 311
L++L SF LP C S L SL+ T+N S SLP M L A
Sbjct: 1121 LVILGCPSFSSLPASIRCLSNLK-SLELTSNNSLTSLPEGMQNLTA 1165
>02_01_0074 +
519401-519512,519513-519548,519647-519706,519785-519877,
519968-520033,520146-520223,520300-520407,520478-520554,
520632-520706,520792-520799,520981-521098,521199-521625,
521627-521661
Length = 430
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/99 (26%), Positives = 41/99 (41%)
Frame = +3
Query: 234 NDNVTKAVFTDLNQKVRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFG 413
N ++ + +LNQK +SI Y+A + +N A N EV F
Sbjct: 324 NASIDRKYIPELNQKFKSIDEAQNYFNFYAYMAGFSIVNAHSARTLSKKRNGEVIRETFK 383
Query: 414 KNEEAANIINTWVEDHTNKRIXNLVDPSSLDSSTQCVLV 530
N+ + N E T++R N V + + +CVLV
Sbjct: 384 YNKYVKSDCNKKEETITSERKTNEV----IGTECKCVLV 418
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,605,136
Number of Sequences: 37544
Number of extensions: 305782
Number of successful extensions: 724
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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