Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_B23
         (171 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ251368-1|CAB86193.1| 1150|Homo sapiens calcium channel, alpha ...    28   4.7  
AJ251367-1|CAB86192.1| 1143|Homo sapiens calcium channel, alpha ...    28   4.7  
AF042793-1|AAB96914.1| 1076|Homo sapiens alpha 2 delta calcium c...    28   4.7  
AF042792-1|AAB96913.1| 1145|Homo sapiens alpha 2 delta calcium c...    28   4.7  
AF040709-1|AAC70914.1| 1145|Homo sapiens putative tumor suppress...    28   4.7  
AB011130-1|BAA25484.1| 1145|Homo sapiens KIAA0558 protein protein.     28   4.7  

>AJ251368-1|CAB86193.1| 1150|Homo sapiens calcium channel, alpha
           2/delta subunit 2 protein.
          Length = 1150

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 14  VVVSGHHERSQPTRAIAHLVGENIRGNITFTRLPDGKV 127
           V V+  +E++QP     HLV  N+R    F     G V
Sbjct: 327 VNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAVQGMV 364


>AJ251367-1|CAB86192.1| 1143|Homo sapiens calcium channel, alpha
           2/delta subunit 2 protein.
          Length = 1143

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 14  VVVSGHHERSQPTRAIAHLVGENIRGNITFTRLPDGKV 127
           V V+  +E++QP     HLV  N+R    F     G V
Sbjct: 327 VNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAVQGMV 364


>AF042793-1|AAB96914.1| 1076|Homo sapiens alpha 2 delta calcium
           channel subunit isoform II protein.
          Length = 1076

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 14  VVVSGHHERSQPTRAIAHLVGENIRGNITFTRLPDGKV 127
           V V+  +E++QP     HLV  N+R    F     G V
Sbjct: 258 VNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAVQGMV 295


>AF042792-1|AAB96913.1| 1145|Homo sapiens alpha 2 delta calcium
           channel subunit isoform I protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 14  VVVSGHHERSQPTRAIAHLVGENIRGNITFTRLPDGKV 127
           V V+  +E++QP     HLV  N+R    F     G V
Sbjct: 327 VNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAVQGMV 364


>AF040709-1|AAC70914.1| 1145|Homo sapiens putative tumor suppressor
           gene 26 protein alpha 2 delta calcium channel subunit
           protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 14  VVVSGHHERSQPTRAIAHLVGENIRGNITFTRLPDGKV 127
           V V+  +E++QP     HLV  N+R    F     G V
Sbjct: 327 VNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAVQGMV 364


>AB011130-1|BAA25484.1| 1145|Homo sapiens KIAA0558 protein protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 14  VVVSGHHERSQPTRAIAHLVGENIRGNITFTRLPDGKV 127
           V V+  +E++QP     HLV  N+R    F     G V
Sbjct: 327 VNVASFNEKAQPVSCFTHLVQANVRNKKVFKEAVQGMV 364


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,232,415
Number of Sequences: 237096
Number of extensions: 458680
Number of successful extensions: 1036
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 76,859,062
effective HSP length: 36
effective length of database: 68,323,606
effective search space used: 1366472120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)