Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_B22
(302 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 79 3e-15
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 79 3e-15
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 79 3e-15
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 79 3e-15
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 79 3e-15
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 79 3e-15
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 79 3e-15
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 77 8e-15
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 27 8.1
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 2 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 178
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 2 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 178
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 2 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 178
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 2 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 178
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 2 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 178
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 2 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 178
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 118 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 2 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 178
RARAHSIQI+KVE I A+ CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 8 RARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 66
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 77.4 bits (182), Expect = 8e-15
Identities = 37/59 (62%), Positives = 43/59 (72%)
Frame = +2
Query: 2 RARAHSIQIIKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNTFAYKRPSTYF 178
RARAHSIQI+KVE I + CRRP VKQFH SKI FPLP RV + + F KRP+T+F
Sbjct: 82 RARAHSIQIMKVEEIAVSKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2
Query: 2 RARAHSIQIIKVEVIKAA 55
RARAHSIQI+ VE I A+
Sbjct: 118 RARAHSIQIMMVEEIAAS 135
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,610,718
Number of Sequences: 237096
Number of extensions: 671903
Number of successful extensions: 1523
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1523
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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