Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_B22
         (302 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   3.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    20   5.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    20   5.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    20   5.8  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    20   5.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   7.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   7.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 38  EVIKAAACRRP--QVKQFHTSKIGFPLPKRV 124
           ++ KAAA +    +++  H+S    PLP RV
Sbjct: 201 KLAKAAASKAALAKLRNVHSSSFCIPLPVRV 231


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 5/19 (26%), Positives = 10/19 (52%)
 Frame = -2

Query: 97  LAGVELLNLWSTTCRCLDY 41
           ++ +  +N+W   C C  Y
Sbjct: 357 VSNLTAMNVWDGVCMCFIY 375


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 5/19 (26%), Positives = 10/19 (52%)
 Frame = -2

Query: 97  LAGVELLNLWSTTCRCLDY 41
           ++ +  +N+W   C C  Y
Sbjct: 326 VSNLTAMNVWDGVCMCFIY 344


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 5/19 (26%), Positives = 10/19 (52%)
 Frame = -2

Query: 97  LAGVELLNLWSTTCRCLDY 41
           ++ +  +N+W   C C  Y
Sbjct: 377 VSNLTAMNVWDGVCMCFIY 395


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 5/19 (26%), Positives = 10/19 (52%)
 Frame = -2

Query: 97  LAGVELLNLWSTTCRCLDY 41
           ++ +  +N+W   C C  Y
Sbjct: 326 VSNLTAMNVWDGVCMCFIY 344


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +1

Query: 103 FPATKTRSPIQASQYLCI 156
           FPA   R  + ++ Y C+
Sbjct: 92  FPAAAFRQDVHSAAYRCV 109


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +1

Query: 103 FPATKTRSPIQASQYLCI 156
           FPA   R  + ++ Y C+
Sbjct: 92  FPAAAFRQDVHSAAYRCV 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,811
Number of Sequences: 438
Number of extensions: 1345
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)