Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_B20
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64852-7|AAB04970.1|  452|Caenorhabditis elegans Hypothetical pr...   186   1e-47
Z74029-6|CAM84812.1|  457|Caenorhabditis elegans Hypothetical pr...   103   1e-22
U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical pr...    33   0.12 
U97012-4|AAK39148.1|  340|Caenorhabditis elegans Serpentine rece...    28   4.6  
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ...    28   4.6  
Z82261-3|CAB05146.1|   67|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81493-8|CAB04043.1|  305|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z37139-8|CAA85487.1|  376|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U64852-7|AAB04970.1|  452|Caenorhabditis elegans Hypothetical
           protein W01A11.1 protein.
          Length = 452

 Score =  186 bits (452), Expect = 1e-47
 Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 6/211 (2%)
 Frame = +3

Query: 3   QFKTSIKGLDIHFIRVRPQVPSGVQIVPLLLMHGWPGSVREFYEAIPLLT---RQTPGYD 173
           QFKT I+GL +HF+ V+P   S   + P+L+ HGWPG+V EFY+ IPLLT   +     D
Sbjct: 118 QFKTEIEGLQVHFLHVKPP-KSYKNVKPILVAHGWPGNVFEFYKFIPLLTDPKKHGIDSD 176

Query: 174 FVFEVVVPSLPGYGFSDAAVRPGLSIPHVADIFRTLMQRLGHKKFYIQGGDWGAAIASGM 353
           F FEV+ PS+PGYG+SD   + G S    A +FR LM RLG+ KFY+QGGDWGA I S +
Sbjct: 177 FAFEVIAPSIPGYGWSDQPKKTGFSQLACARVFRKLMLRLGYNKFYLQGGDWGAIITSLL 236

Query: 354 ATLFPDDILGHHSN---AAITQHPCAMTKTMVGAFIPSLIVESHLADRMYPLSSFFAYLL 524
             ++P +++  H N   A    +       ++G  IPS +    +     P S  F  L+
Sbjct: 237 TKVYPQNVMALHLNMMPAMPGANALGTFYDILGWLIPSTLSSKEIQKTHNPFSK-FGLLI 295

Query: 525 EEFGYFHLQATKPDTIGISLTDSPSGLLAYV 617
            E GY HLQATKPDT G SL DSP GL AY+
Sbjct: 296 VETGYMHLQATKPDTAGTSLNDSPIGLAAYI 326


>Z74029-6|CAM84812.1|  457|Caenorhabditis elegans Hypothetical
           protein C45B11.6 protein.
          Length = 457

 Score =  103 bits (246), Expect = 1e-22
 Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 9/138 (6%)
 Frame = +3

Query: 3   QFKTSIKGLDIHFIRVR-PQVPSGVQIVPLLLMHGWPGSVREFYEAIPLLTRQTP-GYDF 176
           Q+KT I+GL IHF+RV  P      ++VPLL+ HG+PGS  +F++ IP+LT  +  G+DF
Sbjct: 112 QYKTEIEGLKIHFLRVSTPPKDKKSRVVPLLIFHGFPGSFWDFFKIIPILTNPSRHGFDF 171

Query: 177 ------VFEVVVPSLPGYGFSDAAVRPGLSIPHVADIFRTLMQRLGHKKFYIQGGD-WGA 335
                  FEV+VPSLPG+ FSD   + G +    A I   LM RL    +++ G + +G+
Sbjct: 172 GVEEAIQFEVIVPSLPGFIFSDKPTKQGFNAIATARIIAKLMYRLNLNNYFVHGTEGYGS 231

Query: 336 AIASGMATLFPDDILGHH 389
            +A+ +++L+P  I G H
Sbjct: 232 DVATLLSSLYPTRIAGLH 249


>U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical
           protein K02F3.6 protein.
          Length = 404

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
 Frame = +3

Query: 18  IKGLDIHFIRVRP----QVPSGVQIVPLLL-MHGWPGSVREFYEAIPLLTRQTPGYDFVF 182
           ++G D  +I+++      V +G    PL+L +HG+P    EF+ +     ++   +   +
Sbjct: 114 LEGWDSRYIKLKKVRLHYVQTGSDDKPLMLFIHGYP----EFWYSWRFQLKE---FADKY 166

Query: 183 EVVVPSLPGYGFSDAAVR-PGLSIPHVADIFRTLMQRLGHKKFYIQGGDWGAAIASGMAT 359
             V     GY  SD        SI  +    R +++ LG+ K  +   DWG  +A   A 
Sbjct: 167 RCVAIDQRGYNLSDKPKHVDNYSIDELTGDIRDVIEGLGYDKAIVVAHDWGGLVAWQFAE 226

Query: 360 LFPD 371
            +P+
Sbjct: 227 QYPE 230


>U97012-4|AAK39148.1|  340|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 16 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +3

Query: 6   FKTSIKGLDIHFIRVRPQVPSGVQIVPLLLMHGWPGSVREFYEAIPLLTRQTPGYDF 176
           FKT+ K  +I  + +    PS +Q V       W   V  F E +P+L R  P YDF
Sbjct: 124 FKTTFKRNNILLVILAFYFPSFLQAVTY-----WTNFVERF-EILPILMRVHPDYDF 174


>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
           protein Y46G5A.6 protein.
          Length = 1002

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
 Frame = -1

Query: 338 SRAPVSSLYVKLLMSKPL-----H*RPEDICYVRNREARTDCCIRKSISR*TRYNNFKNE 174
           S +PVS  ++  L +  L     H +  DIC +     +T C +++SI R  +  +    
Sbjct: 2   SSSPVSPFHLLKLPTVVLSDVLDHLKTYDICILSATARKTKCIVKQSIERAKKRKSEDQR 61

Query: 173 IISRRLPSQQRYSFVK 126
            +S  + ++Q Y  +K
Sbjct: 62  WLSLSIATRQNYFEIK 77


>Z82261-3|CAB05146.1|   67|Caenorhabditis elegans Hypothetical
           protein C35D6.3 protein.
          Length = 67

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 313 YKEETGARLLHPEWPL 360
           Y+E  G RL  PEWPL
Sbjct: 31  YQERHGTRLTKPEWPL 46


>Z81493-8|CAB04043.1|  305|Caenorhabditis elegans Hypothetical
           protein F01D5.8 protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/59 (25%), Positives = 23/59 (38%)
 Frame = +3

Query: 207 GYGFSDAAVRPGLSIPHVADIFRTLMQRLGHKKFYIQGGDWGAAIASGMATLFPDDILG 383
           GYGFS            V  ++  +++    KK  + G   G   A  +A   PD + G
Sbjct: 119 GYGFSSGTQGEKNVYADVRAVYEKILEMRPDKKIVVMGYSIGTTAAVDLAATNPDRLAG 177


>Z37139-8|CAA85487.1|  376|Caenorhabditis elegans Hypothetical
           protein C14B1.4 protein.
          Length = 376

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 23/89 (25%), Positives = 36/89 (40%)
 Frame = -2

Query: 346 DAIAAPQSPPCM*NFLCPSLCINVLKISAT*GIERPGRTAASENPYPGRLGTTTSKTKSY 167
           D +  P +P    +   PS   N +  S   G   PG +A  + P P   G + S + +Y
Sbjct: 20  DQLTVPNAPDGGSSAPAPSTSPNSISPSNPTGTPAPGASA--QTPNPNAAGASASGSANY 77

Query: 166 PGVCRVSSGIAS*NSLTEPGQPCIRSRGT 80
             +C +     S +S      PC +  GT
Sbjct: 78  KLMCTLEGHTKSISS--AKFSPCGKYLGT 104


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,736,617
Number of Sequences: 27780
Number of extensions: 319443
Number of successful extensions: 734
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)