Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_B20
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    91   8e-21
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    24   1.4  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   3.2  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   4.2  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   9.6  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   9.6  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   9.6  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   9.6  

>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 91.1 bits (216), Expect = 8e-21
 Identities = 40/85 (47%), Positives = 56/85 (65%)
 Frame = +3

Query: 315 QGGDWGAAIASGMATLFPDDILGHHSNAAITQHPCAMTKTMVGAFIPSLIVESHLADRMY 494
           QGGDWG+ IAS MA LFP+ I+G H+N   + +   +    VG + PSLI  +    + +
Sbjct: 1   QGGDWGSVIASDMAVLFPEKIIGLHNNMCTSLNLSNLFWLFVGTYFPSLIGANEHYSKFF 60

Query: 495 PLSSFFAYLLEEFGYFHLQATKPDT 569
           P+S   ++L+EE GYFH+QATKPDT
Sbjct: 61  PVSEILSFLIEESGYFHIQATKPDT 85


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
 Frame = +3

Query: 96  MHGWPGSVREFYEAIPLLTRQTPGYDF-VFEVVVPSLPGYGFSDAAVRPGLSIPHVADIF 272
           +HG PG +   + A+         YD+ ++E+     P      A +R    I   A + 
Sbjct: 334 LHGMPGILGGIFGALMAALATEASYDYSLYEIFPARAPNSETKLAEMRDNYGIS--AGLN 391

Query: 273 RTLMQRLGHKKFYIQGGDWGAAIASGMAT 359
           RT  Q+  ++   +     G AI SG+ T
Sbjct: 392 RTAGQQAAYQLLALV-ITLGIAIVSGLIT 419


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 525 LKDRRKTMIADTFDLQGDFPLSTKV*KLLPSFW-SSRKDAELLQ 397
           L +  +TM A+ +D   +     K+ KL+   W SSR + E  Q
Sbjct: 706 LSNMYRTMEANNYDTAEEAIRDIKIGKLMAFIWDSSRLEFEAAQ 749


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = -3

Query: 381 PKYHQGIEWPFRMQ*PRPSLLLVCKTSYVQASALTS 274
           PKYHQ            P  +  C TS   AS  +S
Sbjct: 7   PKYHQQFHHQQLFSSANPGTIQACTTSPATASLESS 42


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 523 KR*AKNDDSGYIRSA 479
           K  A N  SGYIRSA
Sbjct: 355 KNSAANPPSGYIRSA 369


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 523 KR*AKNDDSGYIRSA 479
           K  A N  SGYIRSA
Sbjct: 355 KNSAANPPSGYIRSA 369


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 523 KR*AKNDDSGYIRSA 479
           K  A N  SGYIRSA
Sbjct: 355 KNSAANPPSGYIRSA 369


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 523 KR*AKNDDSGYIRSA 479
           K  A N  SGYIRSA
Sbjct: 355 KNSAANPPSGYIRSA 369


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 523 KR*AKNDDSGYIRSA 479
           K  A N  SGYIRSA
Sbjct: 355 KNSAANPPSGYIRSA 369


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 523 KR*AKNDDSGYIRSA 479
           K  A N  SGYIRSA
Sbjct: 355 KNSAANPPSGYIRSA 369


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 29  GYPLHPC*TTGTFRSSNSAPAS 94
           GYP +PC T   ++      +S
Sbjct: 116 GYPFNPCLTEAQYKEMEEKVSS 137


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 523 KR*AKNDDSGYIRSA 479
           K  A N  SGYIRSA
Sbjct: 423 KNSAANPPSGYIRSA 437


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 523 KR*AKNDDSGYIRSA 479
           K  A N  SGYIRSA
Sbjct: 423 KNSAANPPSGYIRSA 437


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 29  GYPLHPC*TTGTFRSSNSAPAS 94
           GYP +PC T   ++      +S
Sbjct: 132 GYPFNPCLTEAQYKEMEEKVSS 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,474
Number of Sequences: 438
Number of extensions: 3887
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)