Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_B19
         (601 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK093158-1|BAC04078.1|  144|Homo sapiens protein ( Homo sapiens ...    29   9.4  

>AK093158-1|BAC04078.1|  144|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35839 fis, clone TESTI2006659. ).
          Length = 144

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 21/51 (41%), Positives = 25/51 (49%)
 Frame = -1

Query: 154 ARVASSSCWCSVRGSAFRGGPHRAGGSAGRWVSRVSWASQLGHSAPQRPTR 2
           AR A SS W +  GS ++ G H   G A     R  WAS+ G   PQR  R
Sbjct: 81  ARFAHSS-WKAALGSCYQPGFHTCQGQARLGSVRGVWASEHG-VQPQRTGR 129


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,144,582
Number of Sequences: 237096
Number of extensions: 1394685
Number of successful extensions: 5871
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5869
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)