Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_B19
         (601 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   5.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   9.2  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 318 GLGLELIKRWRSLEKSFPGFEPATALLSCEEAVVE 422
           G+   LIK W++ +  +  +EP + L++C + + E
Sbjct: 257 GVPTYLIK-WKNWDLKYNTWEPISNLINCSDILEE 290


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 595 GYARSAITVTILGTWYPG 542
           GY  +A TV +L TW  G
Sbjct: 410 GYRLTAGTVVLLHTWIAG 427


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 69  PALPPARWGPPRNALPLTLHQHEELATRAE 158
           P L P    PPR A  + +  H++ AT A+
Sbjct: 481 PTLLPQWCLPPREAPLVGVQPHQDSATPAD 510



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 290  HKIQEAHVRRPRTR 331
            +K++E H+ RPR R
Sbjct: 1078 YKVKERHLMRPRKR 1091



 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 526 PGRPSTQTCTPAITCSFSAVTTAAGLSP 443
           PG P+T   T   T + +  TT    +P
Sbjct: 651 PGAPATTITTITTTTTTTTTTTTTTTTP 678


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/35 (22%), Positives = 18/35 (51%)
 Frame = +3

Query: 276 HYEPPIRSKKHTCVGLGLELIKRWRSLEKSFPGFE 380
           +Y+P     +   VG  +EL+  W +++ ++   E
Sbjct: 137 NYDPGRGHIEDDYVGPAMELVYAWSTIDYTYDSIE 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,314
Number of Sequences: 438
Number of extensions: 2223
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)