Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_B08
(577 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 99 4e-22
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 99 4e-22
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 77 2e-15
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 60 2e-10
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 47 2e-06
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 46 4e-06
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 36 0.003
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 36 0.006
SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces pombe... 33 0.030
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 30 0.28
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 28 0.85
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 1.1
SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster... 27 2.0
SPAC22G7.07c |||mRNA |Schizosaccharomyces pombe|chr 1|||Manual 26 4.5
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 25 6.0
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 99.1 bits (236), Expect = 4e-22
Identities = 62/166 (37%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Frame = +3
Query: 57 IENEAHFQSEMTKAGPKLVVVDFTATWCPPCQRIAPFFEQLPAKY--PRAVFLKVDVDRC 230
I + H+ S + K+G + VD A WC PC+ I+P F QL +KY P+ VF KV+VD
Sbjct: 6 IRSYQHWISTIPKSG--YLAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQ 63
Query: 231 AETASAQGISAMPTFIFYRNRTKVDRLQGADPATLESKV----RQFYGTEDAEDLDNA-V 395
+ AS G+ AMPTF+F+ N ++D L GA+P L+ KV + GT +A V
Sbjct: 64 RQIASGLGVKAMPTFVFFENGKQIDMLTGANPQALKEKVALISSKATGTGALASSSSAPV 123
Query: 396 AGHMDLATFITKNECECLNEADNXXXXXXXXXX-XXXXXSDCDEQL 530
G L I + ECLN+ D+ SD DEQL
Sbjct: 124 KGFASLQGCIENPQLECLNQQDDHDLKSAFNSNPSSFLESDVDEQL 169
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 99.1 bits (236), Expect = 4e-22
Identities = 43/82 (52%), Positives = 58/82 (70%)
Frame = +3
Query: 105 KLVVVDFTATWCPPCQRIAPFFEQLPAKYPRAVFLKVDVDRCAETASAQGISAMPTFIFY 284
KLVVVDF ATWC PC+ IAP FEQ Y A F+KVDVD+ +E A+ G+ AMP+F Y
Sbjct: 19 KLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEIAAEAGVHAMPSFFLY 78
Query: 285 RNRTKVDRLQGADPATLESKVR 350
+N K++ + GA+PA LE+ ++
Sbjct: 79 KNGEKIEEIVGANPAKLEASIK 100
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 77.0 bits (181), Expect = 2e-15
Identities = 32/84 (38%), Positives = 53/84 (63%)
Frame = +3
Query: 105 KLVVVDFTATWCPPCQRIAPFFEQLPAKYPRAVFLKVDVDRCAETASAQGISAMPTFIFY 284
K+ VVDF A WC PC+ + PF E+L + +A F+ V+ D+ ++ A G+ A+PT + +
Sbjct: 36 KVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLF 95
Query: 285 RNRTKVDRLQGADPATLESKVRQF 356
R ++DR+ GAD TL S + ++
Sbjct: 96 RKGQELDRIVGADVKTLSSLLAKY 119
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 60.1 bits (139), Expect = 2e-10
Identities = 23/94 (24%), Positives = 53/94 (56%)
Frame = +3
Query: 75 FQSEMTKAGPKLVVVDFTATWCPPCQRIAPFFEQLPAKYPRAVFLKVDVDRCAETASAQG 254
FQ + ++++++F A W PC+++ F+Q AVFLK++ ++ ++ A +
Sbjct: 11 FQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFLKIEAEKFSDIAESFD 70
Query: 255 ISAMPTFIFYRNRTKVDRLQGADPATLESKVRQF 356
++A+P F+ + R+ GA+P L++ + ++
Sbjct: 71 VNAVPLFVLIHGAKVLARISGANPQKLKAAIDEY 104
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 46.8 bits (106), Expect = 2e-06
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +3
Query: 105 KLVVVDFTATWCPPCQRIAPFFEQLPAKY---PRAVFLKVDVDRCAETASAQGISAMPTF 275
K V+V+F A WC C+ +AP +E+L +Y V K+D E + IS PT
Sbjct: 374 KDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKID---ATENDISVSISGFPTI 430
Query: 276 IFYRNRTKVDRLQGADPATLE 338
+F++ KV+ ++ TLE
Sbjct: 431 MFFKANDKVNPVRYEGDRTLE 451
Score = 37.1 bits (82), Expect = 0.002
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 105 KLVVVDFTATWCPPCQRIAPFFEQLPAKYPRAVFLKVDVDRCAE---TASAQGISAMPTF 275
K+++V F A WC C+ +AP +E + + V+VD C E S I PT
Sbjct: 40 KVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVD-CTEEGDLCSEYSIRGYPTL 98
Query: 276 IFYRNRTKVDRLQG 317
++N ++ + G
Sbjct: 99 NVFKNGKQISQYSG 112
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 46.0 bits (104), Expect = 4e-06
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +3
Query: 54 IIENEAHFQSEMT-KAGPKLVVVDFTATWCPPCQRIAPFFEQLPAKYP---RAVFLKVDV 221
++E ++ + E T +A K +++F ATWC C+ +AP +E+L A + + K+D
Sbjct: 22 VVELQSLNELENTIRASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDA 81
Query: 222 DRCAETASAQGISAMPTFIFY 284
D ++ A I+ PT I++
Sbjct: 82 DTHSDVADKYHITGFPTLIWF 102
Score = 41.9 bits (94), Expect = 6e-05
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +3
Query: 105 KLVVVDFTATWCPPCQRIAPFFEQLPAKY---PRAVFLKVDVDRCAETASAQGISAMPTF 275
K V+V+F A WC C+R+AP +E L + P +K++ D A+ +++ PT
Sbjct: 159 KDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTI 218
Query: 276 IFY 284
F+
Sbjct: 219 KFF 221
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 36.3 bits (80), Expect = 0.003
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +3
Query: 42 GLATIIENEAHFQSEMTKAGPKLVVVDFTATWCPPCQRIAPFFEQLPAKYPR---AVFLK 212
G TI N +F+ + GP LVV F A WC C+++ P +++L + +
Sbjct: 30 GSNTIELNSKNFRKFVKAKGPSLVV--FYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVD 87
Query: 213 VDVDRCAETASAQGISAMPTFIFYRNRTKVDRLQGAD 323
D D+ S + PT +K L D
Sbjct: 88 CDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTD 124
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 35.5 bits (78), Expect = 0.006
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Frame = +3
Query: 138 CPPCQRIAPFFEQLPAKYPRAV----FLKVDVDRCAETASAQGISAMPTFIFYRNRTKVD 305
C C+R+ P ++ + K V F +VD E +S I A+PT Y+N V+
Sbjct: 54 CGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANIRAVPTLYLYQNGEIVE 113
Query: 306 RLQ-GADPATLESKVRQFYGTEDAEDLDNAVAGHMDLAT 419
+ GA +T E+ + F T D D + D+ T
Sbjct: 114 EVPFGA--STSEASLLDFVETHLNPDTDPDIPSDEDVLT 150
>SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 233
Score = 33.1 bits (72), Expect = 0.030
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 63 NEAHFQSEMTKAGPKL-VVVDFTATWCPPCQRIAPFFEQLPAKYPRAVFLKVDVDRCAET 239
++ + +E+T A ++ VVV P C+ +A E+L YP+ F+K+ + E
Sbjct: 93 SKPEYTAEVTDASKEVFVVVHMFQDSLPACKLLAAILERLAPMYPQIKFVKIPGKQAVEN 152
Query: 240 ASAQGISAMPTFIFY 284
+ MPT + Y
Sbjct: 153 YPE---AMMPTLLIY 164
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 29.9 bits (64), Expect = 0.28
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 284 IENERRHSTDALSASSLCTSIHVNLKKYCPRILR--RQLFKERCNSLTRRTPSSCEIHN 114
I+ +RH ++ + + + N K +I ++L+KER + L++ S+CEIH+
Sbjct: 166 IDRTKRHFSELFTQKQMLQLQNENFKDDYEKIKEENKRLYKERKSFLSKIEKSACEIHD 224
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 28.3 bits (60), Expect = 0.85
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 341 TF*CCWISTL*PIN-FCSVSIENERRHSTDALSASSLCTSIH 219
TF CC I T+ IN F + + H DAL SS+ TS H
Sbjct: 496 TFTCC-IMTIIRINYFVDNVVTTQTTHEEDALIGSSINTSSH 536
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.9 bits (59), Expect = 1.1
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -1
Query: 460 SASFKHSHSFFVIKVAKSICPATALSKSSASSVP*NCLTLLSN 332
++S++HS F V V + +++S SSASS+P + LSN
Sbjct: 449 TSSYEHSEPFKVSSVPLTSNNFSSISHSSASSLPITPSSYLSN 491
>SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 27.1 bits (57), Expect = 2.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 218 RGSMCRDC*RSRHQCYAYVHF 280
R +C +C +S+ QC Y HF
Sbjct: 59 RKPICYNCIKSKRQCEGYTHF 79
>SPAC22G7.07c |||mRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 413
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 337 KVKSDNFMELKMQRTWIMLLQDIWTWL 417
K K NF++ + + W + L WTWL
Sbjct: 279 KEKYVNFVKKVLFKKWNLTLVSTWTWL 305
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 25.4 bits (53), Expect = 6.0
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -3
Query: 158 NSLTRRTPSSCEIHNN*LWSSFCHFRLKMSFILNYSSKA 42
NSL RR S E N FCHF M+F + SS A
Sbjct: 672 NSLLRRHASPKEKQIN----EFCHFLKSMNFDFDASSSA 706
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,303,330
Number of Sequences: 5004
Number of extensions: 45135
Number of successful extensions: 140
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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