Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_B08
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    91   3e-20
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   1.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.1  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 90.6 bits (215), Expect = 3e-20
 Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = +3

Query: 54  IIENEAHFQSEMTKAGPKLVVVDFTATWCPPCQRIAPFFEQLPAKY-PRAVFLKVDVDRC 230
           ++++   F +++  AG +LVVVDF ATWC PC+ IAP  E+   KY  + V +KVDVD C
Sbjct: 4   MVKDSEDFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDEC 63

Query: 231 AETASAQGISAMPTFIFYRNRTKVDRLQGADPATLESKVRQ 353
            E A+   I++MPTF+F + +  V +  GA+   LE+ ++Q
Sbjct: 64  EELAAQYNIASMPTFLFIKRKEVVGQFSGANAEKLENFIQQ 104


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +1

Query: 472 WHMLFMAVEDFLPVTVMSNLIINI---SFNQLVK 564
           WHMLF  V  FL    + NLI+ I   S+++L K
Sbjct: 402 WHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQK 435


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 283 IETEQKLIGYKVLIQQH*KVKSDNFMELK 369
           +E ++K   Y  LIQ+H K  +D   ELK
Sbjct: 677 LEMQKKRSEYSQLIQEHEKELADFRAELK 705


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,390
Number of Sequences: 2352
Number of extensions: 11184
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)