Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_B08
         (577 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   3.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   3.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   3.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   3.8  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +1

Query: 121 ISQLLGVRRVNELHRSLNSCRRSI 192
           +  ++  R   E+H+++N+C+ SI
Sbjct: 94  LRNIVQFRNTPEVHQAINTCQPSI 117


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 203 YCPRILRRQLFKERCNSLTRRTPSSC 126
           + PR    + F + CNS T     SC
Sbjct: 205 HLPRFTLEKFFTDYCNSKTNTGEYSC 230


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 203 YCPRILRRQLFKERCNSLTRRTPSSC 126
           + PR    + F + CNS T     SC
Sbjct: 205 HLPRFTLEKFFTDYCNSKTNTGEYSC 230


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 72  HFQSEMTKAGPKLVVVDFTATWCPPCQRIAPF 167
           H Q+E  K    L   +F      P +RI+P+
Sbjct: 351 HVQAEAEKHAAMLYQYNFNIIISEPTERISPY 382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,619
Number of Sequences: 438
Number of extensions: 3380
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)